Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3294

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
3,939,738	+		Psyr_3292	0.24	-1.6
3,939,738	+		Psyr_3292	0.24	-2.8
3,939,765	+		Psyr_3292	0.30	-3.0
3,939,880	-		Psyr_3292	0.56	-1.3
3,940,073	-				+1.1
3,940,104	+				+0.2
3,940,105	-				+0.4
3,940,209	+				+0.2
3,940,209	+				+0.7
3,940,210	-				-1.1
3,940,210	-				+0.1
3,940,431	+		Psyr_3293	0.52	-1.1
3,940,432	-		Psyr_3293	0.52	-0.3
3,940,562	-		Psyr_3293	0.81	-0.9
3,940,915	+		Psyr_3294	0.11	+0.3
3,940,915	+		Psyr_3294	0.11	-0.6
3,940,915	+		Psyr_3294	0.11	-0.6
3,940,916	-		Psyr_3294	0.11	-1.1
3,941,074	+		Psyr_3294	0.19	-0.5
3,941,075	-		Psyr_3294	0.19	+1.3
3,941,362	+		Psyr_3294	0.34	+1.0
3,941,362	+		Psyr_3294	0.34	-1.6
3,941,362	+		Psyr_3294	0.34	+0.3
3,941,363	-		Psyr_3294	0.34	-0.3
3,941,473	+		Psyr_3294	0.40	+0.1
3,941,492	+		Psyr_3294	0.41	+1.3
3,941,754	+		Psyr_3294	0.54	-0.1
3,941,754	+		Psyr_3294	0.54	-1.2
3,941,755	-		Psyr_3294	0.55	-1.1
3,942,323	-		Psyr_3294	0.84	-0.3
3,942,653	+				+0.6
3,942,654	-				-2.1
3,942,662	+				+0.2
3,942,714	+				-2.3
3,942,727	+				-3.4
3,942,728	-				-1.6
3,942,728	-				-0.3
3,942,728	-				-0.3
3,942,735	+				-0.6
3,942,789	+				+0.9
3,942,790	-				-1.3
3,942,795	+				+0.4
3,942,796	-				-3.5
3,942,796	-				-2.8
3,942,853	+				-2.5
3,942,924	+				-1.4
3,942,925	-				-1.9
3,942,925	-				-3.5
3,942,928	-				-2.1
3,942,981	+				-2.6
3,942,981	+				-2.8
3,942,981	+				-1.9
3,942,981	+				-1.6
3,942,981	+				-2.1
3,942,981	+				-1.6
3,942,981	+				-2.8
3,942,982	-				-1.3
3,942,982	-				+0.7
3,942,982	-				-2.8
3,942,982	-				-1.1
3,942,982	-				-1.6
3,943,017	+				-4.5
3,943,018	-				-2.2
3,943,027	-		Psyr_3295	0.10	-2.1
3,943,179	+		Psyr_3295	0.18	-3.2
3,943,180	-		Psyr_3295	0.18	-3.8
3,943,180	-		Psyr_3295	0.18	-2.8
3,943,180	-		Psyr_3295	0.18	-0.5
3,943,180	-		Psyr_3295	0.18	-3.2
3,943,180	-		Psyr_3295	0.18	-1.9
3,943,183	-		Psyr_3295	0.18	-2.8
3,943,221	+		Psyr_3295	0.20	-2.6
3,943,230	+		Psyr_3295	0.21	-3.7
3,943,230	+		Psyr_3295	0.21	-3.3
3,943,407	+		Psyr_3295	0.30	-2.6
3,943,407	+		Psyr_3295	0.30	-2.5
3,943,407	+		Psyr_3295	0.30	-2.3
3,943,408	-		Psyr_3295	0.30	-0.9
3,943,408	-		Psyr_3295	0.30	-0.3