Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3219

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
3,853,823	+		Psyr_3217	0.55	-0.1
3,853,823	+		Psyr_3217	0.55	-0.5
3,853,906	-		Psyr_3217	0.64	+0.7
3,853,923	+		Psyr_3217	0.66	-0.4
3,853,923	+		Psyr_3217	0.66	+1.0
3,853,959	+		Psyr_3217	0.70	-0.4
3,854,005	+		Psyr_3217	0.76	-0.5
3,854,045	-		Psyr_3217	0.80	+0.5
3,854,045	-		Psyr_3217	0.80	-0.5
3,854,225	+				+0.9
3,854,226	-				+0.8
3,854,254	-				+0.3
3,854,284	+				+1.4
3,854,297	+				+0.0
3,854,377	+				+0.2
3,854,395	-				-1.3
3,854,417	-				+0.3
3,854,521	-		Psyr_3218	0.42	-0.5
3,854,604	+		Psyr_3218	0.69	-0.9
3,854,631	+		Psyr_3218	0.77	+0.7
3,854,701	-				+1.3
3,854,701	-				+1.7
3,854,812	+				-1.1
3,854,813	-				+0.2
3,854,987	-		Psyr_3219	0.14	+2.0
3,854,990	+		Psyr_3219	0.15	-0.5
3,854,990	+		Psyr_3219	0.15	+0.4
3,854,991	-		Psyr_3219	0.15	+0.4
3,854,991	-		Psyr_3219	0.15	+0.0
3,855,055	+		Psyr_3219	0.18	-1.5
3,855,094	+		Psyr_3219	0.20	-0.2
3,855,124	+		Psyr_3219	0.22	-0.9
3,855,146	+		Psyr_3219	0.23	-0.6
3,855,240	-		Psyr_3219	0.28	+0.5
3,855,313	+		Psyr_3219	0.32	+1.8
3,855,314	-		Psyr_3219	0.32	+1.5
3,855,354	+		Psyr_3219	0.35	-0.0
3,855,354	+		Psyr_3219	0.35	+0.8
3,855,354	+		Psyr_3219	0.35	+2.0
3,855,354	+		Psyr_3219	0.35	+0.7
3,855,593	+		Psyr_3219	0.48	-0.1
3,855,622	-		Psyr_3219	0.49	+0.1
3,855,670	+		Psyr_3219	0.52	-0.1
3,855,760	+		Psyr_3219	0.57	+1.1
3,855,760	+		Psyr_3219	0.57	+1.5
3,855,760	+		Psyr_3219	0.57	-0.9
3,855,760	+		Psyr_3219	0.57	+0.1
3,856,039	+		Psyr_3219	0.73	-1.7
3,856,126	+		Psyr_3219	0.77	+1.2
3,856,321	-		Psyr_3219	0.88	+1.7
3,856,411	+				+1.2
3,856,448	-				+0.3
3,856,582	+				-0.1
3,856,665	+				+0.4
3,856,665	+				+0.4
3,856,665	+				-0.1
3,856,666	-				+0.7
3,856,666	-				-0.2
3,856,666	-				+2.3
3,856,666	-				+0.4
3,856,704	+				-0.4
3,856,844	+		Psyr_3220	0.21	+0.5
3,856,851	-		Psyr_3220	0.22	+0.7
3,856,851	-		Psyr_3220	0.22	+0.5
3,856,895	+		Psyr_3220	0.25	+0.3
3,856,895	+		Psyr_3220	0.25	+2.7
3,856,896	-		Psyr_3220	0.25	-0.7
3,856,896	-		Psyr_3220	0.25	-1.0
3,856,896	-		Psyr_3220	0.25	+1.0
3,856,896	-		Psyr_3220	0.25	-0.9
3,856,951	-		Psyr_3220	0.30	+0.1
3,857,110	+		Psyr_3220	0.43	+0.5
3,857,110	+		Psyr_3220	0.43	-0.2
3,857,110	+		Psyr_3220	0.43	+1.4
3,857,110	+		Psyr_3220	0.43	+0.8
3,857,110	+		Psyr_3220	0.43	-0.3
3,857,110	+		Psyr_3220	0.43	-1.2
3,857,110	+		Psyr_3220	0.43	+1.7
3,857,110	+		Psyr_3220	0.43	-0.5
3,857,110	+		Psyr_3220	0.43	+0.3
3,857,111	-		Psyr_3220	0.43	-0.9
3,857,111	-		Psyr_3220	0.43	-0.3
3,857,111	-		Psyr_3220	0.43	+0.5
3,857,111	-		Psyr_3220	0.43	-0.9
3,857,111	-		Psyr_3220	0.43	-0.3
3,857,111	-		Psyr_3220	0.43	+1.1
3,857,111	-		Psyr_3220	0.43	-0.2
3,857,137	+		Psyr_3220	0.46	-0.3
3,857,250	+		Psyr_3220	0.55	+2.3
3,857,251	-		Psyr_3220	0.55	+0.8
3,857,471	+		Psyr_3220	0.74	-0.3
3,857,471	+		Psyr_3220	0.74	+0.1
3,857,472	-		Psyr_3220	0.74	+0.9