Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3058

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
3,654,636	+		Psyr_3056	0.88	+0.4
3,654,636	+		Psyr_3056	0.88	+0.3
3,654,636	+		Psyr_3056	0.88	+0.0
3,654,636	+		Psyr_3056	0.88	+0.0
3,654,637	-		Psyr_3056	0.88	-1.5
3,654,637	-		Psyr_3056	0.88	-0.0
3,654,637	-		Psyr_3056	0.88	-0.3
3,654,637	-		Psyr_3056	0.88	-2.5
3,654,637	-		Psyr_3056	0.88	-1.3
3,654,770	+				+1.0
3,654,873	+		Psyr_3057	0.13	-0.6
3,654,972	-		Psyr_3057	0.25	+1.7
3,655,603	+				+0.7
3,655,604	-				+1.2
3,655,653	+				+1.8
3,655,653	+				-0.9
3,655,654	-				-0.2
3,655,786	+		Psyr_3058	0.13	-0.5
3,655,787	-		Psyr_3058	0.13	+0.4
3,655,907	-		Psyr_3058	0.22	-0.7
3,656,003	+		Psyr_3058	0.29	-0.7
3,656,618	+		Psyr_3058	0.72	-1.3
3,656,619	-		Psyr_3058	0.72	-0.6
3,656,619	-		Psyr_3058	0.72	-0.6
3,656,797	-		Psyr_3058	0.85	-1.6
3,656,878	+				-0.3
3,656,878	+				+0.6
3,656,878	+				-0.3
3,656,879	-				+1.0
3,656,879	-				-0.2
3,656,879	-				+0.3
3,657,037	-				+2.0
3,657,051	+				+1.3
3,657,052	-				-0.5
3,657,052	-				-1.1
3,657,088	+				-0.5
3,657,833	+		Psyr_3059	0.32	+0.2
3,657,834	-		Psyr_3059	0.32	+2.0
3,657,834	-		Psyr_3059	0.32	+0.3
3,657,834	-		Psyr_3059	0.32	+0.9
3,657,842	-		Psyr_3059	0.33	+0.7
3,657,842	-		Psyr_3059	0.33	+0.5
3,657,842	-		Psyr_3059	0.33	+0.1
3,657,919	+		Psyr_3059	0.37	+0.5
3,657,919	+		Psyr_3059	0.37	+1.3
3,657,919	+		Psyr_3059	0.37	-0.3
3,657,919	+		Psyr_3059	0.37	-0.6
3,657,919	+		Psyr_3059	0.37	+0.2
3,657,919	+		Psyr_3059	0.37	-0.5
3,657,919	+		Psyr_3059	0.37	-0.3
3,657,920	-		Psyr_3059	0.37	-0.5
3,657,920	-		Psyr_3059	0.37	-0.1
3,657,920	-		Psyr_3059	0.37	-0.1
3,657,920	-		Psyr_3059	0.37	+0.2
3,657,920	-		Psyr_3059	0.37	+0.7
3,657,920	-		Psyr_3059	0.37	-0.3
3,657,920	-		Psyr_3059	0.37	-0.3
3,657,924	-		Psyr_3059	0.38	+0.2
3,657,924	-		Psyr_3059	0.38	+0.5