Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1895

Experiment: KB with Carbenicillin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 250 ug/ml
2,165,626	+		Psyr_1894	0.73	-0.3
2,165,626	+		Psyr_1894	0.73	-0.6
2,165,626	+		Psyr_1894	0.73	+0.7
2,165,626	+		Psyr_1894	0.73	+0.7
2,165,627	-		Psyr_1894	0.73	-0.2
2,165,627	-		Psyr_1894	0.73	-0.1
2,165,627	-		Psyr_1894	0.73	+0.4
2,165,627	-		Psyr_1894	0.73	+0.7
2,165,627	-		Psyr_1894	0.73	+0.6
2,165,627	-		Psyr_1894	0.73	-2.8
2,165,627	-		Psyr_1894	0.73	+1.3
2,166,151	+				+1.4
2,166,151	+				-0.8
2,166,151	+				-0.3
2,166,151	+				+1.0
2,166,151	+				+0.1
2,166,151	+				+0.7
2,166,152	-				-1.9
2,166,152	-				-0.1
2,166,152	-				+0.7
2,166,152	-				+0.7
2,166,197	-				-0.3
2,166,280	+				-0.0
2,166,281	-				-0.3
2,166,315	+				-0.3
2,166,315	+				-0.1
2,166,428	+				-1.0
2,166,428	+				-1.3
2,166,429	-				+0.2
2,166,429	-				+0.7
2,166,432	+				-1.1
2,166,432	+				+0.3
2,166,432	+				-0.4
2,166,433	-				-0.4
2,166,433	-				+0.2
2,166,433	-				+0.9
2,166,433	-				+1.3
2,166,433	-				-0.1
2,166,487	+				+0.9
2,166,487	+				+1.4
2,166,487	+				+0.8
2,166,487	+				+0.8
2,166,488	-				+1.7
2,166,488	-				-2.5
2,166,488	-				+0.5
2,166,507	+		Psyr_1895	0.13	-0.6
2,166,731	-		Psyr_1895	0.56	-1.0
2,166,731	-		Psyr_1895	0.56	-0.3
2,166,731	-		Psyr_1895	0.56	-1.3
2,167,232	-				-1.6
2,167,338	+		Psyr_1896	0.11	+0.8
2,167,338	-		Psyr_1896	0.11	+2.1
2,167,339	-		Psyr_1896	0.11	-1.0
2,167,339	-		Psyr_1896	0.11	+0.3
2,167,371	+		Psyr_1896	0.11	+1.5
2,167,494	+		Psyr_1896	0.15	+0.7
2,167,494	+		Psyr_1896	0.15	+1.7
2,167,495	-		Psyr_1896	0.15	-2.0
2,167,613	-		Psyr_1896	0.19	+1.8
2,167,680	+		Psyr_1896	0.20	-0.0
2,167,686	+		Psyr_1896	0.21	-1.2
2,167,845	+		Psyr_1896	0.25	+0.2