Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_523 and Pf6N2E2_524 are separated by 148 nucleotides Pf6N2E2_524 and Pf6N2E2_525 are separated by 327 nucleotides Pf6N2E2_525 and Pf6N2E2_526 are separated by 171 nucleotides
Pf6N2E2_523 - Inositol transport system ATP-binding protein, at 591,944 to 593,497
_523
Pf6N2E2_524 - Inositol transport system permease protein, at 593,646 to 594,668
_524
Pf6N2E2_525 - C4-type zinc finger protein, DksA/TraR family, at 594,996 to 595,400
_525
Pf6N2E2_526 - Methyl-accepting chemotaxis protein, at 595,572 to 597,185
_526
Position (kb) 593
594
595 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 592.664 kb on + strand, within Pf6N2E2_523 at 592.664 kb on + strand, within Pf6N2E2_523 at 592.664 kb on + strand, within Pf6N2E2_523 at 592.664 kb on + strand, within Pf6N2E2_523 at 592.664 kb on + strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.665 kb on - strand, within Pf6N2E2_523 at 592.924 kb on + strand, within Pf6N2E2_523 at 592.963 kb on + strand, within Pf6N2E2_523 at 593.087 kb on + strand, within Pf6N2E2_523 at 593.087 kb on + strand, within Pf6N2E2_523 at 593.087 kb on + strand, within Pf6N2E2_523 at 593.087 kb on + strand, within Pf6N2E2_523 at 593.088 kb on - strand, within Pf6N2E2_523 at 593.312 kb on + strand, within Pf6N2E2_523 at 593.312 kb on + strand, within Pf6N2E2_523 at 593.327 kb on + strand, within Pf6N2E2_523 at 593.328 kb on - strand, within Pf6N2E2_523 at 593.328 kb on - strand, within Pf6N2E2_523 at 593.383 kb on - strand at 593.515 kb on + strand at 593.515 kb on + strand at 593.515 kb on + strand at 593.515 kb on + strand at 593.516 kb on - strand at 593.549 kb on - strand at 593.645 kb on + strand at 593.646 kb on - strand at 593.720 kb on + strand at 593.720 kb on + strand at 593.721 kb on - strand at 593.721 kb on - strand at 593.721 kb on - strand at 594.080 kb on + strand, within Pf6N2E2_524 at 594.141 kb on + strand, within Pf6N2E2_524 at 594.141 kb on + strand, within Pf6N2E2_524 at 594.141 kb on + strand, within Pf6N2E2_524 at 594.141 kb on + strand, within Pf6N2E2_524 at 594.141 kb on + strand, within Pf6N2E2_524 at 594.142 kb on - strand, within Pf6N2E2_524 at 594.142 kb on - strand, within Pf6N2E2_524 at 594.180 kb on + strand, within Pf6N2E2_524 at 594.180 kb on + strand, within Pf6N2E2_524 at 594.180 kb on + strand, within Pf6N2E2_524 at 594.181 kb on - strand, within Pf6N2E2_524 at 594.245 kb on + strand, within Pf6N2E2_524 at 594.268 kb on - strand, within Pf6N2E2_524 at 594.276 kb on + strand, within Pf6N2E2_524 at 594.276 kb on + strand, within Pf6N2E2_524 at 594.276 kb on + strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.277 kb on - strand, within Pf6N2E2_524 at 594.282 kb on + strand, within Pf6N2E2_524 at 594.282 kb on + strand, within Pf6N2E2_524 at 594.282 kb on + strand, within Pf6N2E2_524 at 594.283 kb on - strand, within Pf6N2E2_524 at 594.354 kb on + strand, within Pf6N2E2_524 at 594.354 kb on + strand, within Pf6N2E2_524 at 594.355 kb on - strand, within Pf6N2E2_524 at 594.355 kb on - strand, within Pf6N2E2_524 at 594.355 kb on - strand, within Pf6N2E2_524 at 594.441 kb on + strand, within Pf6N2E2_524 at 594.441 kb on + strand, within Pf6N2E2_524 at 594.442 kb on - strand, within Pf6N2E2_524 at 594.442 kb on - strand, within Pf6N2E2_524 at 594.582 kb on + strand at 594.582 kb on + strand at 594.582 kb on + strand at 594.583 kb on - strand at 594.583 kb on - strand at 594.583 kb on - strand at 594.730 kb on + strand at 594.730 kb on + strand at 594.731 kb on - strand at 594.731 kb on - strand at 594.731 kb on - strand at 594.731 kb on - strand at 594.731 kb on - strand at 594.731 kb on - strand at 594.733 kb on + strand at 594.734 kb on - strand at 594.734 kb on - strand at 594.734 kb on - strand at 594.734 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.740 kb on - strand at 594.760 kb on - strand at 594.760 kb on - strand at 594.761 kb on + strand at 594.762 kb on - strand at 594.762 kb on - strand at 594.909 kb on - strand at 594.991 kb on + strand at 594.991 kb on + strand at 595.035 kb on + strand at 595.035 kb on + strand at 595.035 kb on + strand at 595.035 kb on + strand at 595.035 kb on + strand at 595.035 kb on + strand at 595.187 kb on + strand, within Pf6N2E2_525 at 595.187 kb on + strand, within Pf6N2E2_525 at 595.256 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.341 kb on + strand, within Pf6N2E2_525 at 595.342 kb on - strand, within Pf6N2E2_525 at 595.342 kb on - strand, within Pf6N2E2_525 at 595.342 kb on - strand, within Pf6N2E2_525 at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.471 kb on + strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.472 kb on - strand at 595.477 kb on + strand at 595.477 kb on + strand at 595.477 kb on + strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.478 kb on - strand at 595.523 kb on - strand at 595.534 kb on - strand at 595.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 592,664 + Pf6N2E2_523 0.46 -2.6 592,664 + Pf6N2E2_523 0.46 -3.1 592,664 + Pf6N2E2_523 0.46 -4.3 592,664 + Pf6N2E2_523 0.46 -2.8 592,664 + Pf6N2E2_523 0.46 -1.7 592,665 - Pf6N2E2_523 0.46 -4.2 592,665 - Pf6N2E2_523 0.46 -1.8 592,665 - Pf6N2E2_523 0.46 -2.8 592,665 - Pf6N2E2_523 0.46 -3.6 592,665 - Pf6N2E2_523 0.46 -1.7 592,665 - Pf6N2E2_523 0.46 -1.5 592,924 + Pf6N2E2_523 0.63 -3.2 592,963 + Pf6N2E2_523 0.66 -4.8 593,087 + Pf6N2E2_523 0.74 -2.5 593,087 + Pf6N2E2_523 0.74 -4.6 593,087 + Pf6N2E2_523 0.74 -1.9 593,087 + Pf6N2E2_523 0.74 -2.5 593,088 - Pf6N2E2_523 0.74 -4.6 593,312 + Pf6N2E2_523 0.88 -1.9 593,312 + Pf6N2E2_523 0.88 -2.2 593,327 + Pf6N2E2_523 0.89 -5.0 593,328 - Pf6N2E2_523 0.89 -2.8 593,328 - Pf6N2E2_523 0.89 -0.2 593,383 - -2.2 593,515 + -3.9 593,515 + -1.7 593,515 + -2.1 593,515 + -0.5 593,516 - -2.1 593,549 - -3.4 593,645 + -3.3 593,646 - -2.7 593,720 + -4.3 593,720 + -1.1 593,721 - -2.8 593,721 - -3.8 593,721 - -1.1 594,080 + Pf6N2E2_524 0.42 -3.4 594,141 + Pf6N2E2_524 0.48 -4.4 594,141 + Pf6N2E2_524 0.48 -3.0 594,141 + Pf6N2E2_524 0.48 -4.5 594,141 + Pf6N2E2_524 0.48 -2.8 594,141 + Pf6N2E2_524 0.48 -3.0 594,142 - Pf6N2E2_524 0.48 -2.4 594,142 - Pf6N2E2_524 0.48 -3.2 594,180 + Pf6N2E2_524 0.52 -3.8 594,180 + Pf6N2E2_524 0.52 -3.1 594,180 + Pf6N2E2_524 0.52 -4.0 594,181 - Pf6N2E2_524 0.52 -1.9 594,245 + Pf6N2E2_524 0.59 -1.9 594,268 - Pf6N2E2_524 0.61 -3.1 594,276 + Pf6N2E2_524 0.62 -4.9 594,276 + Pf6N2E2_524 0.62 -3.1 594,276 + Pf6N2E2_524 0.62 -1.3 594,277 - Pf6N2E2_524 0.62 -3.8 594,277 - Pf6N2E2_524 0.62 -2.2 594,277 - Pf6N2E2_524 0.62 -3.7 594,277 - Pf6N2E2_524 0.62 -3.2 594,277 - Pf6N2E2_524 0.62 -1.8 594,277 - Pf6N2E2_524 0.62 +0.1 594,282 + Pf6N2E2_524 0.62 -1.5 594,282 + Pf6N2E2_524 0.62 -2.4 594,282 + Pf6N2E2_524 0.62 -3.2 594,283 - Pf6N2E2_524 0.62 -2.6 594,354 + Pf6N2E2_524 0.69 -2.7 594,354 + Pf6N2E2_524 0.69 -2.3 594,355 - Pf6N2E2_524 0.69 -2.5 594,355 - Pf6N2E2_524 0.69 -2.2 594,355 - Pf6N2E2_524 0.69 -0.5 594,441 + Pf6N2E2_524 0.78 -3.8 594,441 + Pf6N2E2_524 0.78 -1.1 594,442 - Pf6N2E2_524 0.78 -2.2 594,442 - Pf6N2E2_524 0.78 -2.2 594,582 + -2.3 594,582 + -3.0 594,582 + -4.4 594,583 - -3.5 594,583 - -1.2 594,583 - -3.2 594,730 + -0.9 594,730 + -1.2 594,731 - -0.4 594,731 - +0.2 594,731 - +0.3 594,731 - +1.0 594,731 - +0.0 594,731 - +0.3 594,733 + -1.2 594,734 - +0.3 594,734 - +0.2 594,734 - +0.1 594,734 - +0.8 594,740 - +0.6 594,740 - +0.2 594,740 - -0.2 594,740 - +0.7 594,740 - -1.3 594,740 - +0.2 594,740 - +1.3 594,740 - +0.4 594,760 - +0.4 594,760 - -0.3 594,761 + -0.6 594,762 - +1.0 594,762 - +0.1 594,909 - +0.8 594,991 + +2.5 594,991 + +1.4 595,035 + +1.1 595,035 + +2.1 595,035 + +2.5 595,035 + +2.1 595,035 + +0.6 595,035 + +1.8 595,187 + Pf6N2E2_525 0.47 +0.8 595,187 + Pf6N2E2_525 0.47 +1.6 595,256 + Pf6N2E2_525 0.64 +2.0 595,341 + Pf6N2E2_525 0.85 +1.4 595,341 + Pf6N2E2_525 0.85 +1.6 595,341 + Pf6N2E2_525 0.85 +2.3 595,341 + Pf6N2E2_525 0.85 +3.0 595,341 + Pf6N2E2_525 0.85 +1.5 595,341 + Pf6N2E2_525 0.85 +2.1 595,342 - Pf6N2E2_525 0.85 +1.3 595,342 - Pf6N2E2_525 0.85 +1.4 595,342 - Pf6N2E2_525 0.85 +1.5 595,471 + +0.1 595,471 + +0.2 595,471 + +0.2 595,471 + +0.2 595,471 + +0.6 595,471 + -1.7 595,471 + +0.2 595,471 + +0.8 595,471 + +0.4 595,472 - +0.7 595,472 - +1.2 595,472 - +1.0 595,472 - -0.4 595,472 - +0.6 595,472 - +0.8 595,472 - +1.3 595,477 + +0.1 595,477 + +1.7 595,477 + +1.0 595,478 - +1.4 595,478 - -0.7 595,478 - +0.6 595,478 - +0.0 595,478 - +0.2 595,478 - +0.7 595,478 - +0.5 595,523 - +0.7 595,534 - -2.0 595,555 - +0.1
Or see this region's nucleotide sequence