Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2679

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
3,016,487	+				+0.5
3,016,487	+				+0.0
3,016,487	+				-0.9
3,016,487	+				-0.2
3,016,578	+		Pf1N1B4_2678	0.34	+1.5
3,016,578	+		Pf1N1B4_2678	0.34	-0.7
3,016,603	-		Pf1N1B4_2678	0.42	-2.0
3,016,738	+				+0.3
3,016,764	+				+0.5
3,016,764	+				-1.0
3,016,764	+				+0.2
3,016,765	-				-0.3
3,016,765	-				-0.8
3,016,765	-				+1.3
3,016,765	-				-0.5
3,016,765	-				-0.3
3,016,765	-				-0.4
3,016,810	+				+0.5
3,016,810	+				-1.0
3,016,810	+				+1.0
3,016,810	+				-0.1
3,016,810	+				+1.2
3,016,811	-				-0.5
3,016,811	-				+0.2
3,016,811	-				+1.5
3,016,811	-				+0.1
3,016,832	+				-0.8
3,016,832	+				-0.8
3,016,832	+				+0.8
3,016,832	+				-0.1
3,016,832	+				+0.2
3,016,832	+				+2.5
3,016,833	-				-0.4
3,016,833	-				-0.5
3,016,833	-				+0.2
3,016,833	-				+1.5
3,016,833	-				+0.7
3,016,833	-				-0.9
3,016,833	-				-0.1
3,016,903	+				+0.8
3,016,903	+				+0.2
3,016,903	+				+0.0
3,016,903	+				+2.8
3,016,903	+				+0.2
3,016,903	+				+0.2
3,016,904	-				-0.6
3,016,904	-				-1.1
3,016,904	-				-0.7
3,016,907	+				+1.5
3,016,907	+				+0.8
3,016,907	+				-1.3
3,016,908	-				+0.7
3,016,908	-				+0.2
3,016,908	-				-0.5
3,016,908	-				+0.5
3,016,908	-				+1.5
3,016,908	-				-0.2
3,016,908	-				+0.4
3,016,908	-				-0.4
3,016,908	-				-0.2
3,016,911	+				-0.5
3,016,912	-				+1.1
3,016,912	-				-1.0
3,016,912	-				-0.3
3,016,912	-				+0.8
3,017,014	+		Pf1N1B4_2679	0.17	+0.8
3,017,014	+		Pf1N1B4_2679	0.17	-0.4
3,017,014	+		Pf1N1B4_2679	0.17	-0.8
3,017,015	-				+0.5
3,017,015	-		Pf1N1B4_2679	0.18	-0.5
3,017,015	-		Pf1N1B4_2679	0.18	-0.5
3,017,015	-		Pf1N1B4_2679	0.18	+0.2
3,017,170	+		Pf1N1B4_2679	0.42	-0.5
3,017,171	-		Pf1N1B4_2679	0.42	-0.5
3,017,171	-				+0.5
3,017,171	-		Pf1N1B4_2679	0.42	+2.5
3,017,439	+		Pf1N1B4_2679	0.84	-0.3
3,017,442	+		Pf1N1B4_2679	0.84	-0.7
3,017,443	-		Pf1N1B4_2679	0.84	+0.8
3,017,443	-		Pf1N1B4_2679	0.84	+0.8
3,017,450	+		Pf1N1B4_2679	0.85	+0.4
3,017,451	-		Pf1N1B4_2679	0.86	-1.7
3,017,470	-		Pf1N1B4_2679	0.88	+0.0
3,017,520	+				-0.5
3,017,520	+				-1.1
3,017,520	+				+0.5
3,017,520	+				-0.5
3,017,520	+				+1.5
3,017,520	+				+0.3
3,017,520	+				+1.1
3,017,520	+				-0.8
3,017,520	+				+0.4
3,017,520	+				-0.1
3,017,520	+				+1.0
3,017,520	+				+1.5
3,017,520	+				+0.5
3,017,520	+				+0.2
3,017,521	-				+0.5
3,017,521	-				+1.0
3,017,521	-				-1.1
3,017,521	-				+0.9
3,017,521	-				-0.5
3,017,521	-				+0.3
3,017,521	-				-0.4
3,017,521	-				-0.4
3,017,521	-				-0.3
3,017,521	-				-1.1
3,017,521	-				-0.1
3,017,521	-				-0.8
3,017,539	+				+0.1
3,017,539	+				-1.2
3,017,539	+				-0.1
3,017,539	+				-0.9
3,017,539	+				-0.3
3,017,540	-				-1.0
3,017,540	-				-1.8
3,017,540	-				+0.9
3,017,540	-				-0.1
3,017,540	-				+0.8
3,017,540	-				+0.8
3,017,540	-				+0.5
3,017,540	-				+1.5
3,017,540	-				-0.5
3,017,543	+				-0.3
3,017,543	+				+0.6
3,017,543	+				+0.4
3,017,543	+				+1.0
3,017,543	+				-0.8
3,017,543	+				+0.1
3,017,543	+				+0.5
3,017,544	-				-0.1
3,017,560	+				+0.4
3,017,561	-				+0.2
3,017,561	-				-0.8
3,017,561	-				+0.5
3,017,563	+				-0.5
3,017,563	+				+2.5
3,017,563	+				+0.8
3,017,563	+				+1.1
3,017,563	+				+0.8
3,017,563	+				-1.2
3,017,563	+				-1.3
3,017,564	-				+0.0
3,017,564	-				+1.5
3,017,564	-				-0.8
3,017,564	-				-0.1
3,017,572	+				+0.5
3,017,573	-				+1.5
3,017,573	-				-1.2
3,017,573	-				-0.3
3,017,806	+		Pf1N1B4_2680	0.14	-0.3
3,017,806	+		Pf1N1B4_2680	0.14	-0.5
3,017,807	-				+0.5
3,017,807	-		Pf1N1B4_2680	0.14	-0.8
3,017,807	-		Pf1N1B4_2680	0.14	-0.5
3,017,914	+		Pf1N1B4_2680	0.20	-0.5
3,017,914	+		Pf1N1B4_2680	0.20	-0.3
3,017,915	-		Pf1N1B4_2680	0.20	+0.5
3,018,058	+		Pf1N1B4_2680	0.28	-0.6
3,018,058	+		Pf1N1B4_2680	0.28	-0.5
3,018,058	+		Pf1N1B4_2680	0.28	+0.5
3,018,059	-		Pf1N1B4_2680	0.28	+1.5
3,018,059	-		Pf1N1B4_2680	0.28	-1.1
3,018,223	+		Pf1N1B4_2680	0.38	-0.7
3,018,223	+		Pf1N1B4_2680	0.38	+1.5
3,018,223	+		Pf1N1B4_2680	0.38	+0.7
3,018,223	+		Pf1N1B4_2680	0.38	+0.5
3,018,224	-		Pf1N1B4_2680	0.38	+0.7
3,018,280	+		Pf1N1B4_2680	0.41	+0.2
3,018,280	+		Pf1N1B4_2680	0.41	+1.5
3,018,280	+		Pf1N1B4_2680	0.41	-0.5
3,018,280	+				-0.1
3,018,280	+		Pf1N1B4_2680	0.41	+0.7
3,018,281	-				+1.2
3,018,281	-		Pf1N1B4_2680	0.41	+0.1
3,018,281	-		Pf1N1B4_2680	0.41	+0.1
3,018,281	-		Pf1N1B4_2680	0.41	+0.6
3,018,281	-		Pf1N1B4_2680	0.41	+0.8
3,018,410	+		Pf1N1B4_2680	0.49	-0.3
3,018,410	+		Pf1N1B4_2680	0.49	-0.2
3,018,411	-		Pf1N1B4_2680	0.49	+1.0
3,018,411	-		Pf1N1B4_2680	0.49	+1.5
3,018,458	+		Pf1N1B4_2680	0.52	-0.5
3,018,458	+		Pf1N1B4_2680	0.52	-0.6
3,018,458	+		Pf1N1B4_2680	0.52	-0.5
3,018,458	+		Pf1N1B4_2680	0.52	+0.3
3,018,458	+		Pf1N1B4_2680	0.52	+0.2
3,018,459	-		Pf1N1B4_2680	0.52	-0.5
3,018,459	-		Pf1N1B4_2680	0.52	+0.9
3,018,459	-		Pf1N1B4_2680	0.52	+1.2
3,018,459	-		Pf1N1B4_2680	0.52	+1.0
3,018,472	+		Pf1N1B4_2680	0.53	-0.0
3,018,472	+		Pf1N1B4_2680	0.53	-0.5
3,018,473	-		Pf1N1B4_2680	0.53	+0.1
3,018,473	-		Pf1N1B4_2680	0.53	-0.6
3,018,473	-		Pf1N1B4_2680	0.53	+0.7
3,018,473	-		Pf1N1B4_2680	0.53	-1.1
3,018,473	-		Pf1N1B4_2680	0.53	-1.3
3,018,473	-		Pf1N1B4_2680	0.53	-0.4
3,018,473	-		Pf1N1B4_2680	0.53	-0.2
3,018,473	-		Pf1N1B4_2680	0.53	+1.2
3,018,499	+		Pf1N1B4_2680	0.54	-2.1
3,018,499	+		Pf1N1B4_2680	0.54	+0.9
3,018,500	-		Pf1N1B4_2680	0.54	+0.3
3,018,500	-		Pf1N1B4_2680	0.54	-1.0