Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16775

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
3,675,013	-				+1.1
3,675,013	-				-0.1
3,675,013	-				+0.1
3,675,013	-				-0.7
3,675,013	-				+1.2
3,675,013	-				+0.0
3,675,013	-				+0.4
3,675,013	-				-0.0
3,675,013	-				-0.3
3,675,013	-				+0.4
3,675,013	-				+0.3
3,675,013	-				+1.3
3,675,013	-				+0.4
3,675,013	-				+0.1
3,675,013	-				-0.6
3,675,013	-				-0.1
3,675,013	-				+0.0
3,675,013	-				+0.8
3,675,013	-				+1.5
3,675,013	-				-0.1
3,675,013	-				+0.3
3,675,013	-				-0.1
3,675,013	-				-0.1
3,675,013	-				-0.9
3,675,013	-				+1.5
3,675,013	-				+0.9
3,675,013	-				+0.2
3,675,013	-				-0.1
3,675,013	-				+0.7
3,675,013	-				+0.2
3,675,013	-				+0.2
3,675,013	-				+0.5
3,675,013	-				+1.8
3,675,013	-				+0.1
3,675,013	-				-0.6
3,675,013	-				+0.8
3,675,013	-				+0.2
3,675,013	-				+0.8
3,675,013	-				+0.3
3,675,013	-				-0.9
3,675,013	-				-0.6
3,675,013	-				+0.8
3,675,013	-				-0.8
3,675,013	-				+0.5
3,675,013	-				+0.8
3,675,013	-				+0.5
3,675,013	-				-0.3
3,675,013	-				-0.2
3,675,013	-				+0.8
3,675,013	-				-1.1
3,675,013	-				-0.4
3,675,148	+				+0.6
3,675,148	+				-0.2
3,675,148	+				+0.2
3,675,148	+				+0.4
3,675,148	+				+0.3
3,675,148	+				+1.8
3,675,148	+				+0.6
3,675,148	+				-1.1
3,675,148	+				-0.6
3,675,148	+				+0.1
3,675,149	-				-1.4
3,675,149	-				+0.6
3,675,149	-				+0.1
3,675,149	-				-0.0
3,675,149	-				-0.9
3,675,149	-				-0.4
3,675,149	-				+0.1
3,675,149	-				-0.1
3,675,149	-				-0.6
3,675,149	-				-1.4
3,675,149	-				-1.5
3,675,149	-				-0.7
3,675,150	+				-0.5
3,675,150	+				-1.0
3,675,150	+				-1.2
3,675,150	+				-0.4
3,675,150	+				-0.5
3,675,150	+				-1.0
3,675,150	+				+0.2
3,675,150	+				-1.5
3,675,150	+				-1.8
3,675,150	+				-0.5
3,675,150	+				-0.8
3,675,150	+				-0.8
3,675,150	+				-0.7
3,675,150	+				-1.1
3,675,150	+				-2.6
3,675,150	+				-0.6
3,675,150	+				-1.8
3,675,150	+				+0.5
3,675,151	-				-0.6
3,675,151	-				+0.5
3,675,151	-				-0.7
3,675,151	-				-1.5
3,675,151	-				-0.6
3,675,151	-				-0.5
3,675,151	-				-0.3
3,675,151	-				-0.4
3,675,151	-				-0.9
3,675,151	-				+0.3
3,675,151	-				+0.6
3,675,176	-				-1.1
3,675,186	+				-0.3
3,675,187	-				-0.9
3,675,187	-				-0.7
3,675,264	+				-3.9
3,675,264	+				-1.5
3,675,265	-				-0.3
3,675,265	-				-1.4
3,675,275	+				-0.6
3,675,276	-				+0.1
3,675,325	+				+0.0
3,675,325	+				+1.6
3,675,325	+				-0.5
3,675,325	+				+1.0
3,675,325	+				+0.8
3,675,325	+				-0.6
3,675,325	+				+1.6
3,675,325	+				-0.8
3,675,325	+				-0.2
3,675,325	+				+0.5
3,675,325	+				-0.4
3,675,325	+				+1.6
3,675,325	+				+0.2
3,675,325	+				+0.4
3,675,325	+				+0.3
3,675,325	+				+0.2
3,675,325	+				+1.8
3,675,325	+				-0.3
3,675,325	+				+2.0
3,675,325	+				+0.7
3,675,325	+				-0.3
3,675,325	+				-0.2
3,675,325	+				+1.0
3,675,325	+				+0.9
3,675,325	+				-0.6
3,675,325	+				-0.2
3,675,325	+				+0.3
3,675,325	+				+0.1
3,675,325	+				-0.4
3,675,325	+				-0.5
3,675,325	+				+0.4
3,675,325	+				-0.0
3,675,325	+				+0.8
3,675,325	+				+0.4
3,675,325	+				-0.7
3,675,325	+				+0.6
3,675,325	+				+0.0
3,675,325	+				+0.3
3,675,326	-				-0.3
3,675,326	-				-1.2
3,675,326	-				-0.4
3,675,326	-				-0.8
3,675,326	-				+0.7
3,675,326	-				+2.2
3,675,326	-				-0.7
3,675,326	-				-0.2
3,675,326	-				-0.9
3,675,326	-				-0.4
3,675,326	-				+0.0
3,675,326	-				-0.2
3,675,326	-				-0.5
3,675,326	-				-1.4
3,675,326	-				+0.4
3,675,326	-				-0.4
3,675,326	-				+0.7
3,675,326	-				-0.2
3,675,326	-				+0.2
3,675,326	-				+1.0
3,675,326	-				-1.8
3,675,326	-				+0.1
3,675,326	-				-0.4
3,675,326	-				-0.8
3,675,326	-				-0.5
3,675,326	-				-0.8
3,675,326	-				-0.0
3,675,326	-				-0.6
3,675,326	-				-0.7
3,675,326	-				+0.1
3,675,326	-				-0.0
3,675,326	-				-0.6
3,675,326	-				-0.5
3,675,326	-				-0.2
3,675,326	-				+0.4
3,675,326	-				-1.6
3,675,326	-				-0.3
3,675,326	-				-0.7
3,675,500	-		LRK54_RS16770	0.31	+0.4
3,675,572	+		LRK54_RS16770	0.41	+0.2
3,675,572	+		LRK54_RS16770	0.41	+0.6
3,675,573	-		LRK54_RS16770	0.41	-0.6
3,675,573	-		LRK54_RS16770	0.41	+0.2
3,675,573	-		LRK54_RS16770	0.41	+0.4
3,675,700	+		LRK54_RS16770	0.59	+0.7
3,675,700	+		LRK54_RS16770	0.59	+0.1
3,675,700	+		LRK54_RS16770	0.59	+0.1
3,675,701	-		LRK54_RS16770	0.59	+0.3
3,675,701	-		LRK54_RS16770	0.59	+0.4
3,675,701	-		LRK54_RS16770	0.59	+0.9
3,675,701	-		LRK54_RS16770	0.59	+1.0
3,675,701	-		LRK54_RS16770	0.59	-0.6
3,675,800	+		LRK54_RS16770	0.73	+0.9
3,675,800	+		LRK54_RS16770	0.73	+1.7
3,675,800	+		LRK54_RS16770	0.73	+0.0
3,675,800	+		LRK54_RS16770	0.73	+0.3
3,675,800	+		LRK54_RS16770	0.73	+0.1
3,675,801	-		LRK54_RS16770	0.74	+1.6
3,675,801	-		LRK54_RS16770	0.74	+0.0
3,675,801	-		LRK54_RS16770	0.74	+0.2
3,675,801	-		LRK54_RS16770	0.74	-0.7
3,675,865	+		LRK54_RS16770	0.83	+1.8
3,675,865	+		LRK54_RS16770	0.83	+0.5
3,675,865	+		LRK54_RS16770	0.83	-0.1
3,675,865	+		LRK54_RS16770	0.83	+0.5
3,675,865	+		LRK54_RS16770	0.83	-0.9
3,675,865	+		LRK54_RS16770	0.83	+0.3
3,675,865	+		LRK54_RS16770	0.83	+0.7
3,675,865	+		LRK54_RS16770	0.83	+0.3
3,675,865	+		LRK54_RS16770	0.83	-0.1
3,675,865	+		LRK54_RS16770	0.83	+0.8
3,675,866	-		LRK54_RS16770	0.83	+0.1
3,675,866	-		LRK54_RS16770	0.83	-0.4
3,675,866	-		LRK54_RS16770	0.83	+0.3
3,675,866	-		LRK54_RS16770	0.83	+0.5
3,675,866	-		LRK54_RS16770	0.83	+0.2
3,675,866	-		LRK54_RS16770	0.83	-0.5
3,675,866	-		LRK54_RS16770	0.83	+0.7
3,675,866	-		LRK54_RS16770	0.83	-0.3
3,675,929	+				+0.8
3,676,000	+				-0.7
3,676,000	+				-1.7
3,676,000	+				+0.1
3,676,000	+				-0.1
3,676,000	+				+0.5
3,676,000	+				+1.1
3,676,000	+				+0.4
3,676,000	+				+0.3
3,676,000	+				+0.4
3,676,000	+				+0.4
3,676,000	+				-0.3
3,676,000	+				+0.5
3,676,000	+				-0.1
3,676,000	+				-1.4
3,676,000	+				-0.9
3,676,000	+				-0.7
3,676,000	+				-0.4
3,676,000	+				-0.0
3,676,000	+				-1.6
3,676,000	+				-0.8
3,676,000	+				-0.4
3,676,001	-				+0.2
3,676,001	-				-0.8
3,676,001	-				-0.7
3,676,001	-				-0.3
3,676,001	-				+0.1
3,676,001	-				+0.7
3,676,001	-				+0.2
3,676,001	-				+0.5
3,676,001	-				+0.2
3,676,001	-				-0.5
3,676,001	-				+0.7
3,676,001	-				+0.6
3,676,001	-				+0.5
3,676,001	-				-0.0
3,676,001	-				+0.3
3,676,001	-				+0.3
3,676,001	-				-0.4
3,676,001	-				+0.0
3,676,034	-				-0.4
3,677,408	+				-0.2
3,677,408	+				-0.4
3,677,409	-				-0.8