Experiment: R2A with Zinc 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03285 and CA265_RS03290 are separated by 246 nucleotides CA265_RS03290 and CA265_RS03295 overlap by 1 nucleotides
CA265_RS03285: CA265_RS03285 - hypothetical protein, at 802,630 to 803,361
_RS03285
CA265_RS03290: CA265_RS03290 - gliding motility-associated ABC transporter permease subunit GldF, at 803,608 to 804,333
_RS03290
CA265_RS03295: CA265_RS03295 - gliding motility-associated ABC transporter substrate-binding protein GldG, at 804,333 to 806,018
_RS03295
Position (kb) 803
804
805 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 802.672 kb on - strand at 802.688 kb on + strand at 802.692 kb on - strand at 802.763 kb on + strand, within CA265_RS03285 at 802.820 kb on - strand, within CA265_RS03285 at 802.822 kb on - strand, within CA265_RS03285 at 802.836 kb on + strand, within CA265_RS03285 at 802.866 kb on + strand, within CA265_RS03285 at 802.883 kb on + strand, within CA265_RS03285 at 802.904 kb on + strand, within CA265_RS03285 at 802.904 kb on + strand, within CA265_RS03285 at 802.972 kb on - strand, within CA265_RS03285 at 802.978 kb on - strand, within CA265_RS03285 at 803.006 kb on - strand, within CA265_RS03285 at 803.080 kb on + strand, within CA265_RS03285 at 803.097 kb on - strand, within CA265_RS03285 at 803.126 kb on + strand, within CA265_RS03285 at 803.127 kb on - strand, within CA265_RS03285 at 803.127 kb on - strand, within CA265_RS03285 at 803.143 kb on - strand, within CA265_RS03285 at 803.143 kb on - strand, within CA265_RS03285 at 803.187 kb on + strand, within CA265_RS03285 at 803.237 kb on + strand, within CA265_RS03285 at 803.238 kb on - strand, within CA265_RS03285 at 803.238 kb on - strand, within CA265_RS03285 at 803.274 kb on - strand, within CA265_RS03285 at 803.294 kb on - strand at 803.319 kb on - strand at 803.333 kb on + strand at 803.334 kb on - strand at 803.379 kb on + strand at 803.380 kb on - strand at 803.388 kb on - strand at 803.388 kb on - strand at 803.390 kb on - strand at 803.392 kb on + strand at 803.395 kb on - strand at 803.395 kb on - strand at 803.454 kb on + strand at 803.455 kb on - strand at 803.458 kb on + strand at 803.458 kb on + strand at 803.459 kb on - strand at 803.491 kb on - strand at 803.491 kb on - strand at 803.495 kb on - strand at 803.496 kb on + strand at 803.499 kb on + strand at 803.577 kb on + strand at 803.578 kb on - strand at 803.599 kb on + strand at 803.600 kb on - strand at 803.611 kb on + strand at 803.663 kb on - strand at 803.665 kb on - strand at 803.730 kb on - strand, within CA265_RS03290 at 803.730 kb on - strand, within CA265_RS03290 at 803.738 kb on - strand, within CA265_RS03290 at 803.738 kb on - strand, within CA265_RS03290 at 803.848 kb on + strand, within CA265_RS03290 at 803.849 kb on - strand, within CA265_RS03290 at 803.858 kb on + strand, within CA265_RS03290 at 803.927 kb on + strand, within CA265_RS03290 at 803.928 kb on - strand, within CA265_RS03290 at 803.937 kb on - strand, within CA265_RS03290 at 803.953 kb on + strand, within CA265_RS03290 at 803.959 kb on + strand, within CA265_RS03290 at 804.155 kb on - strand, within CA265_RS03290 at 804.224 kb on - strand, within CA265_RS03290 at 804.224 kb on - strand, within CA265_RS03290 at 804.249 kb on - strand, within CA265_RS03290 at 804.265 kb on - strand at 804.268 kb on + strand at 804.317 kb on + strand at 804.371 kb on + strand at 804.449 kb on + strand at 804.449 kb on + strand at 804.507 kb on - strand, within CA265_RS03295 at 804.609 kb on - strand, within CA265_RS03295 at 804.692 kb on - strand, within CA265_RS03295 at 804.837 kb on - strand, within CA265_RS03295 at 804.837 kb on - strand, within CA265_RS03295 at 804.839 kb on - strand, within CA265_RS03295 at 804.867 kb on - strand, within CA265_RS03295 at 804.892 kb on + strand, within CA265_RS03295 at 804.906 kb on - strand, within CA265_RS03295 at 804.915 kb on - strand, within CA265_RS03295 at 804.991 kb on - strand, within CA265_RS03295 at 805.017 kb on - strand, within CA265_RS03295 at 805.020 kb on - strand, within CA265_RS03295 at 805.020 kb on - strand, within CA265_RS03295 at 805.083 kb on - strand, within CA265_RS03295 at 805.157 kb on - strand, within CA265_RS03295 at 805.157 kb on - strand, within CA265_RS03295 at 805.157 kb on - strand, within CA265_RS03295 at 805.212 kb on - strand, within CA265_RS03295 at 805.229 kb on + strand, within CA265_RS03295 at 805.230 kb on - strand, within CA265_RS03295 at 805.243 kb on - strand, within CA265_RS03295 at 805.257 kb on - strand, within CA265_RS03295 at 805.260 kb on + strand, within CA265_RS03295 at 805.315 kb on + strand, within CA265_RS03295 at 805.316 kb on - strand, within CA265_RS03295
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Zinc 0.08 mM remove 802,672 - +0.1 802,688 + +0.4 802,692 - +0.1 802,763 + CA265_RS03285 0.18 +0.6 802,820 - CA265_RS03285 0.26 +0.2 802,822 - CA265_RS03285 0.26 -0.4 802,836 + CA265_RS03285 0.28 -1.9 802,866 + CA265_RS03285 0.32 -0.2 802,883 + CA265_RS03285 0.35 -0.4 802,904 + CA265_RS03285 0.37 +0.4 802,904 + CA265_RS03285 0.37 -0.5 802,972 - CA265_RS03285 0.47 +0.0 802,978 - CA265_RS03285 0.48 -0.7 803,006 - CA265_RS03285 0.51 -0.0 803,080 + CA265_RS03285 0.61 +0.1 803,097 - CA265_RS03285 0.64 +0.4 803,126 + CA265_RS03285 0.68 -0.6 803,127 - CA265_RS03285 0.68 -0.8 803,127 - CA265_RS03285 0.68 -0.0 803,143 - CA265_RS03285 0.70 +0.1 803,143 - CA265_RS03285 0.70 +0.5 803,187 + CA265_RS03285 0.76 +0.2 803,237 + CA265_RS03285 0.83 -0.8 803,238 - CA265_RS03285 0.83 -0.1 803,238 - CA265_RS03285 0.83 +0.4 803,274 - CA265_RS03285 0.88 +1.0 803,294 - +0.1 803,319 - -1.2 803,333 + +0.7 803,334 - +0.8 803,379 + -0.5 803,380 - +0.8 803,388 - +0.6 803,388 - +0.4 803,390 - +0.6 803,392 + +0.2 803,395 - -0.7 803,395 - +0.3 803,454 + +0.3 803,455 - +0.6 803,458 + +1.0 803,458 + +0.2 803,459 - -0.2 803,491 - -0.2 803,491 - +0.5 803,495 - -3.0 803,496 + +0.2 803,499 + -0.2 803,577 + -0.1 803,578 - +1.6 803,599 + +0.2 803,600 - +1.5 803,611 + +1.7 803,663 - +1.9 803,665 - +1.9 803,730 - CA265_RS03290 0.17 +2.0 803,730 - CA265_RS03290 0.17 +1.9 803,738 - CA265_RS03290 0.18 +1.7 803,738 - CA265_RS03290 0.18 +0.7 803,848 + CA265_RS03290 0.33 +1.5 803,849 - CA265_RS03290 0.33 +2.1 803,858 + CA265_RS03290 0.34 +1.8 803,927 + CA265_RS03290 0.44 +1.6 803,928 - CA265_RS03290 0.44 +1.8 803,937 - CA265_RS03290 0.45 +1.3 803,953 + CA265_RS03290 0.48 +1.9 803,959 + CA265_RS03290 0.48 +1.7 804,155 - CA265_RS03290 0.75 +2.5 804,224 - CA265_RS03290 0.85 +1.5 804,224 - CA265_RS03290 0.85 +1.4 804,249 - CA265_RS03290 0.88 +2.3 804,265 - +1.6 804,268 + +2.0 804,317 + -1.0 804,371 + +1.8 804,449 + +1.7 804,449 + +1.0 804,507 - CA265_RS03295 0.10 +2.3 804,609 - CA265_RS03295 0.16 +1.0 804,692 - CA265_RS03295 0.21 +0.7 804,837 - CA265_RS03295 0.30 +1.1 804,837 - CA265_RS03295 0.30 +1.2 804,839 - CA265_RS03295 0.30 +2.4 804,867 - CA265_RS03295 0.32 +1.5 804,892 + CA265_RS03295 0.33 +0.9 804,906 - CA265_RS03295 0.34 +1.9 804,915 - CA265_RS03295 0.35 +2.6 804,991 - CA265_RS03295 0.39 +1.7 805,017 - CA265_RS03295 0.41 +2.4 805,020 - CA265_RS03295 0.41 +1.8 805,020 - CA265_RS03295 0.41 +0.9 805,083 - CA265_RS03295 0.44 +1.4 805,157 - CA265_RS03295 0.49 +1.7 805,157 - CA265_RS03295 0.49 +1.7 805,157 - CA265_RS03295 0.49 +1.0 805,212 - CA265_RS03295 0.52 +2.1 805,229 + CA265_RS03295 0.53 +2.5 805,230 - CA265_RS03295 0.53 +1.6 805,243 - CA265_RS03295 0.54 +1.7 805,257 - CA265_RS03295 0.55 +1.5 805,260 + CA265_RS03295 0.55 +1.5 805,315 + CA265_RS03295 0.58 +1.7 805,316 - CA265_RS03295 0.58 +1.9
Or see this region's nucleotide sequence