Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS08665 and BPHYT_RS08670 are separated by 125 nucleotides BPHYT_RS08670 and BPHYT_RS08675 are separated by 57 nucleotides BPHYT_RS08675 and BPHYT_RS08680 are separated by 148 nucleotides BPHYT_RS08680 and BPHYT_RS08685 are separated by 316 nucleotides BPHYT_RS08685 and BPHYT_RS08690 are separated by 90 nucleotides
BPHYT_RS08665: BPHYT_RS08665 - hypothetical protein, at 1,972,979 to 1,973,176
_RS08665
BPHYT_RS08670: BPHYT_RS08670 - hypothetical protein, at 1,973,302 to 1,973,574
_RS08670
BPHYT_RS08675: BPHYT_RS08675 - bleomycin resistance protein, at 1,973,632 to 1,974,000
_RS08675
BPHYT_RS08680: BPHYT_RS08680 - hypothetical protein, at 1,974,149 to 1,974,415
_RS08680
BPHYT_RS08685: BPHYT_RS08685 - hypothetical protein, at 1,974,732 to 1,974,956
_RS08685
BPHYT_RS08690: BPHYT_RS08690 - hypothetical protein, at 1,975,047 to 1,975,292
_RS08690
Position (kb) 1974
1975 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1973.153 kb on + strand, within BPHYT_RS08665 at 1973.353 kb on + strand, within BPHYT_RS08670 at 1973.354 kb on - strand, within BPHYT_RS08670 at 1973.455 kb on - strand, within BPHYT_RS08670 at 1973.465 kb on + strand, within BPHYT_RS08670 at 1973.465 kb on + strand, within BPHYT_RS08670 at 1973.466 kb on - strand, within BPHYT_RS08670 at 1973.715 kb on + strand, within BPHYT_RS08675 at 1973.716 kb on - strand, within BPHYT_RS08675 at 1973.864 kb on + strand, within BPHYT_RS08675 at 1973.865 kb on - strand, within BPHYT_RS08675 at 1973.865 kb on - strand, within BPHYT_RS08675 at 1973.890 kb on + strand, within BPHYT_RS08675 at 1973.896 kb on + strand, within BPHYT_RS08675 at 1973.897 kb on - strand, within BPHYT_RS08675 at 1974.068 kb on + strand at 1974.322 kb on - strand, within BPHYT_RS08680 at 1974.507 kb on + strand at 1974.507 kb on + strand at 1974.519 kb on - strand at 1974.548 kb on + strand at 1974.677 kb on + strand at 1974.822 kb on - strand, within BPHYT_RS08685 at 1974.861 kb on + strand, within BPHYT_RS08685 at 1974.861 kb on + strand, within BPHYT_RS08685 at 1974.862 kb on - strand, within BPHYT_RS08685 at 1974.862 kb on - strand, within BPHYT_RS08685 at 1974.925 kb on + strand, within BPHYT_RS08685 at 1974.926 kb on - strand, within BPHYT_RS08685 at 1975.104 kb on + strand, within BPHYT_RS08690 at 1975.104 kb on + strand, within BPHYT_RS08690 at 1975.104 kb on + strand, within BPHYT_RS08690 at 1975.104 kb on + strand, within BPHYT_RS08690 at 1975.105 kb on - strand, within BPHYT_RS08690 at 1975.105 kb on - strand, within BPHYT_RS08690
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,973,153 + BPHYT_RS08665 0.88 -0.0 1,973,353 + BPHYT_RS08670 0.19 -0.2 1,973,354 - BPHYT_RS08670 0.19 +0.5 1,973,455 - BPHYT_RS08670 0.56 +0.0 1,973,465 + BPHYT_RS08670 0.60 +0.2 1,973,465 + BPHYT_RS08670 0.60 +0.2 1,973,466 - BPHYT_RS08670 0.60 +0.7 1,973,715 + BPHYT_RS08675 0.22 -0.0 1,973,716 - BPHYT_RS08675 0.23 -3.0 1,973,864 + BPHYT_RS08675 0.63 -0.2 1,973,865 - BPHYT_RS08675 0.63 +2.7 1,973,865 - BPHYT_RS08675 0.63 +0.6 1,973,890 + BPHYT_RS08675 0.70 -2.0 1,973,896 + BPHYT_RS08675 0.72 +0.1 1,973,897 - BPHYT_RS08675 0.72 -2.2 1,974,068 + -0.2 1,974,322 - BPHYT_RS08680 0.65 -1.5 1,974,507 + -1.3 1,974,507 + +0.4 1,974,519 - +0.6 1,974,548 + -0.5 1,974,677 + +0.8 1,974,822 - BPHYT_RS08685 0.40 +0.9 1,974,861 + BPHYT_RS08685 0.57 +0.7 1,974,861 + BPHYT_RS08685 0.57 +0.2 1,974,862 - BPHYT_RS08685 0.58 -0.6 1,974,862 - BPHYT_RS08685 0.58 +0.3 1,974,925 + BPHYT_RS08685 0.86 +0.4 1,974,926 - BPHYT_RS08685 0.86 -0.1 1,975,104 + BPHYT_RS08690 0.23 +0.3 1,975,104 + BPHYT_RS08690 0.23 -0.8 1,975,104 + BPHYT_RS08690 0.23 -0.1 1,975,104 + BPHYT_RS08690 0.23 +0.5 1,975,105 - BPHYT_RS08690 0.24 +0.4 1,975,105 - BPHYT_RS08690 0.24 -2.0
Or see this region's nucleotide sequence