Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02240 and BPHYT_RS02245 are separated by 85 nucleotides BPHYT_RS02245 and BPHYT_RS02250 are separated by 187 nucleotides
BPHYT_RS02240: BPHYT_RS02240 - isocitrate dehydrogenase kinase/phosphatase, at 514,158 to 515,996
_RS02240
BPHYT_RS02245: BPHYT_RS02245 - MerR family transcriptional regulator, at 516,082 to 516,486
_RS02245
BPHYT_RS02250: BPHYT_RS02250 - Zn-dependent hydrolase, at 516,674 to 517,747
_RS02250
Position (kb) 516
517 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 515.109 kb on - strand, within BPHYT_RS02240 at 515.111 kb on - strand, within BPHYT_RS02240 at 515.338 kb on + strand, within BPHYT_RS02240 at 515.356 kb on + strand, within BPHYT_RS02240 at 515.548 kb on + strand, within BPHYT_RS02240 at 515.584 kb on + strand, within BPHYT_RS02240 at 515.584 kb on + strand, within BPHYT_RS02240 at 515.585 kb on - strand, within BPHYT_RS02240 at 515.719 kb on + strand, within BPHYT_RS02240 at 515.720 kb on - strand, within BPHYT_RS02240 at 515.816 kb on - strand at 515.823 kb on - strand at 516.042 kb on - strand at 516.263 kb on + strand, within BPHYT_RS02245 at 516.330 kb on + strand, within BPHYT_RS02245 at 516.357 kb on - strand, within BPHYT_RS02245 at 516.400 kb on + strand, within BPHYT_RS02245 at 516.473 kb on + strand at 516.473 kb on + strand at 516.591 kb on + strand at 517.215 kb on - strand, within BPHYT_RS02250 at 517.416 kb on + strand, within BPHYT_RS02250 at 517.468 kb on - strand, within BPHYT_RS02250
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 515,109 - BPHYT_RS02240 0.52 -2.1 515,111 - BPHYT_RS02240 0.52 -1.2 515,338 + BPHYT_RS02240 0.64 -0.8 515,356 + BPHYT_RS02240 0.65 -1.8 515,548 + BPHYT_RS02240 0.76 -0.7 515,584 + BPHYT_RS02240 0.78 -1.3 515,584 + BPHYT_RS02240 0.78 -1.7 515,585 - BPHYT_RS02240 0.78 -2.5 515,719 + BPHYT_RS02240 0.85 -4.6 515,720 - BPHYT_RS02240 0.85 -3.4 515,816 - -2.8 515,823 - -3.0 516,042 - -2.6 516,263 + BPHYT_RS02245 0.45 +1.8 516,330 + BPHYT_RS02245 0.61 -0.7 516,357 - BPHYT_RS02245 0.68 +0.2 516,400 + BPHYT_RS02245 0.79 +0.0 516,473 + +0.3 516,473 + -0.2 516,591 + -1.1 517,215 - BPHYT_RS02250 0.50 -0.2 517,416 + BPHYT_RS02250 0.69 -0.7 517,468 - BPHYT_RS02250 0.74 -0.1
Or see this region's nucleotide sequence