Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02470 and ABIE51_RS02475 are separated by 47 nucleotides ABIE51_RS02475 and ABIE51_RS02480 are separated by 28 nucleotides ABIE51_RS02480 and ABIE51_RS02485 are separated by 379 nucleotides
ABIE51_RS02470: ABIE51_RS02470 - sel1 repeat family protein, at 548,210 to 549,292
_RS02470
ABIE51_RS02475: ABIE51_RS02475 - antibiotic biosynthesis monooxygenase, at 549,340 to 549,642
_RS02475
ABIE51_RS02480: ABIE51_RS02480 - TMEM175 family protein, at 549,671 to 550,372
_RS02480
ABIE51_RS02485: ABIE51_RS02485 - glutathione-independent formaldehyde dehydrogenase, at 550,752 to 551,891
_RS02485
Position (kb) 549
550
551 Strain fitness (log2 ratio) -2
-1
0
1 at 548.697 kb on + strand, within ABIE51_RS02470 at 548.697 kb on + strand, within ABIE51_RS02470 at 548.698 kb on - strand, within ABIE51_RS02470 at 548.698 kb on - strand, within ABIE51_RS02470 at 548.713 kb on - strand, within ABIE51_RS02470 at 548.713 kb on - strand, within ABIE51_RS02470 at 548.725 kb on - strand, within ABIE51_RS02470 at 548.725 kb on - strand, within ABIE51_RS02470 at 548.791 kb on - strand, within ABIE51_RS02470 at 548.923 kb on + strand, within ABIE51_RS02470 at 548.923 kb on + strand, within ABIE51_RS02470 at 548.923 kb on + strand, within ABIE51_RS02470 at 548.924 kb on - strand, within ABIE51_RS02470 at 548.927 kb on + strand, within ABIE51_RS02470 at 549.071 kb on + strand, within ABIE51_RS02470 at 549.071 kb on + strand, within ABIE51_RS02470 at 549.305 kb on + strand at 549.305 kb on + strand at 549.306 kb on - strand at 549.306 kb on - strand at 549.306 kb on - strand at 549.351 kb on - strand at 549.833 kb on + strand, within ABIE51_RS02480 at 549.835 kb on + strand, within ABIE51_RS02480 at 549.836 kb on - strand, within ABIE51_RS02480 at 549.836 kb on - strand, within ABIE51_RS02480 at 549.836 kb on - strand, within ABIE51_RS02480 at 549.914 kb on + strand, within ABIE51_RS02480 at 549.915 kb on - strand, within ABIE51_RS02480 at 549.947 kb on + strand, within ABIE51_RS02480 at 550.131 kb on - strand, within ABIE51_RS02480 at 550.325 kb on + strand at 550.326 kb on - strand at 550.370 kb on + strand at 550.371 kb on - strand at 550.371 kb on - strand at 550.679 kb on - strand at 550.723 kb on + strand at 550.724 kb on - strand at 550.724 kb on - strand at 550.732 kb on - strand at 550.768 kb on - strand at 550.884 kb on + strand, within ABIE51_RS02485 at 550.884 kb on + strand, within ABIE51_RS02485 at 550.885 kb on - strand, within ABIE51_RS02485 at 550.945 kb on + strand, within ABIE51_RS02485 at 550.945 kb on + strand, within ABIE51_RS02485 at 551.139 kb on + strand, within ABIE51_RS02485 at 551.140 kb on - strand, within ABIE51_RS02485 at 551.140 kb on - strand, within ABIE51_RS02485 at 551.203 kb on - strand, within ABIE51_RS02485 at 551.212 kb on - strand, within ABIE51_RS02485 at 551.296 kb on - strand, within ABIE51_RS02485 at 551.296 kb on - strand, within ABIE51_RS02485 at 551.328 kb on + strand, within ABIE51_RS02485 at 551.353 kb on - strand, within ABIE51_RS02485
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 548,697 + ABIE51_RS02470 0.45 +1.1 548,697 + ABIE51_RS02470 0.45 -0.0 548,698 - ABIE51_RS02470 0.45 +0.1 548,698 - ABIE51_RS02470 0.45 -0.2 548,713 - ABIE51_RS02470 0.46 +0.6 548,713 - ABIE51_RS02470 0.46 -0.1 548,725 - ABIE51_RS02470 0.48 -0.8 548,725 - ABIE51_RS02470 0.48 +0.3 548,791 - ABIE51_RS02470 0.54 +0.3 548,923 + ABIE51_RS02470 0.66 -1.0 548,923 + ABIE51_RS02470 0.66 +0.6 548,923 + ABIE51_RS02470 0.66 -0.3 548,924 - ABIE51_RS02470 0.66 +0.1 548,927 + ABIE51_RS02470 0.66 +0.0 549,071 + ABIE51_RS02470 0.80 +0.4 549,071 + ABIE51_RS02470 0.80 +0.3 549,305 + +0.7 549,305 + -0.0 549,306 - -0.5 549,306 - +0.2 549,306 - +0.8 549,351 - +0.7 549,833 + ABIE51_RS02480 0.23 -0.8 549,835 + ABIE51_RS02480 0.23 -0.3 549,836 - ABIE51_RS02480 0.24 -0.2 549,836 - ABIE51_RS02480 0.24 -0.7 549,836 - ABIE51_RS02480 0.24 -0.6 549,914 + ABIE51_RS02480 0.35 -1.0 549,915 - ABIE51_RS02480 0.35 -0.1 549,947 + ABIE51_RS02480 0.39 +0.1 550,131 - ABIE51_RS02480 0.66 +0.9 550,325 + -0.1 550,326 - +0.1 550,370 + -0.2 550,371 - -0.3 550,371 - -0.1 550,679 - -0.0 550,723 + +0.5 550,724 - +0.1 550,724 - -0.2 550,732 - +0.0 550,768 - -0.0 550,884 + ABIE51_RS02485 0.12 +0.4 550,884 + ABIE51_RS02485 0.12 -1.2 550,885 - ABIE51_RS02485 0.12 -0.2 550,945 + ABIE51_RS02485 0.17 +1.0 550,945 + ABIE51_RS02485 0.17 -0.4 551,139 + ABIE51_RS02485 0.34 -0.8 551,140 - ABIE51_RS02485 0.34 +0.2 551,140 - ABIE51_RS02485 0.34 -0.0 551,203 - ABIE51_RS02485 0.40 -0.1 551,212 - ABIE51_RS02485 0.40 -0.2 551,296 - ABIE51_RS02485 0.48 -2.1 551,296 - ABIE51_RS02485 0.48 +0.7 551,328 + ABIE51_RS02485 0.51 +0.1 551,353 - ABIE51_RS02485 0.53 +0.3
Or see this region's nucleotide sequence