Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20707 and SM_b20708 are separated by 1 nucleotides SM_b20708 and SM_b20709 are separated by 210 nucleotides
SM_b20707: SM_b20707 - adenylate cyclase, at 1,509,109 to 1,510,371
_b20707
SM_b20708: SM_b20708 - methylated-DNA--protein-cysteine methyltransferase, at 1,510,373 to 1,510,924
_b20708
SM_b20709: SM_b20709 - 3-methyladenine DNA glycosylase, at 1,511,135 to 1,511,692
_b20709
Position (kb)
1510
1511 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1509.569 kb on + strand, within SM_b20707 at 1509.607 kb on + strand, within SM_b20707 at 1509.607 kb on + strand, within SM_b20707 at 1509.728 kb on + strand, within SM_b20707 at 1509.728 kb on + strand, within SM_b20707 at 1509.729 kb on - strand, within SM_b20707 at 1509.801 kb on + strand, within SM_b20707 at 1509.801 kb on + strand, within SM_b20707 at 1509.801 kb on + strand, within SM_b20707 at 1509.802 kb on - strand, within SM_b20707 at 1509.885 kb on + strand, within SM_b20707 at 1509.885 kb on + strand, within SM_b20707 at 1509.908 kb on + strand, within SM_b20707 at 1509.909 kb on - strand, within SM_b20707 at 1509.909 kb on - strand, within SM_b20707 at 1509.941 kb on + strand, within SM_b20707 at 1509.942 kb on - strand, within SM_b20707 at 1509.950 kb on + strand, within SM_b20707 at 1510.067 kb on + strand, within SM_b20707 at 1510.067 kb on + strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.068 kb on - strand, within SM_b20707 at 1510.072 kb on - strand, within SM_b20707 at 1510.072 kb on - strand, within SM_b20707 at 1510.105 kb on + strand, within SM_b20707 at 1510.106 kb on - strand, within SM_b20707 at 1510.608 kb on + strand, within SM_b20708 at 1510.651 kb on - strand, within SM_b20708 at 1510.651 kb on - strand, within SM_b20708 at 1510.654 kb on + strand, within SM_b20708 at 1510.655 kb on - strand, within SM_b20708 at 1510.655 kb on - strand, within SM_b20708 at 1510.655 kb on - strand, within SM_b20708 at 1510.914 kb on + strand at 1510.978 kb on + strand at 1510.978 kb on + strand at 1511.052 kb on - strand at 1511.173 kb on + strand at 1511.241 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.439 kb on + strand, within SM_b20709 at 1511.481 kb on + strand, within SM_b20709 at 1511.481 kb on + strand, within SM_b20709 at 1511.482 kb on - strand, within SM_b20709 at 1511.482 kb on - strand, within SM_b20709 at 1511.896 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,509,569 + SM_b20707 0.36 -0.5 1,509,607 + SM_b20707 0.39 +0.1 1,509,607 + SM_b20707 0.39 +0.4 1,509,728 + SM_b20707 0.49 +0.4 1,509,728 + SM_b20707 0.49 +0.1 1,509,729 - SM_b20707 0.49 -0.5 1,509,801 + SM_b20707 0.55 +0.0 1,509,801 + SM_b20707 0.55 -0.1 1,509,801 + SM_b20707 0.55 -0.1 1,509,802 - SM_b20707 0.55 +1.8 1,509,885 + SM_b20707 0.61 -0.4 1,509,885 + SM_b20707 0.61 -0.1 1,509,908 + SM_b20707 0.63 -0.4 1,509,909 - SM_b20707 0.63 +0.2 1,509,909 - SM_b20707 0.63 +0.3 1,509,941 + SM_b20707 0.66 -0.1 1,509,942 - SM_b20707 0.66 +0.7 1,509,950 + SM_b20707 0.67 -0.1 1,510,067 + SM_b20707 0.76 -0.6 1,510,067 + SM_b20707 0.76 -0.4 1,510,068 - SM_b20707 0.76 -0.5 1,510,068 - SM_b20707 0.76 -0.1 1,510,068 - SM_b20707 0.76 +1.6 1,510,068 - SM_b20707 0.76 -2.9 1,510,068 - SM_b20707 0.76 -0.4 1,510,068 - SM_b20707 0.76 -0.3 1,510,068 - SM_b20707 0.76 -0.4 1,510,068 - SM_b20707 0.76 +0.0 1,510,068 - SM_b20707 0.76 +0.0 1,510,072 - SM_b20707 0.76 -0.9 1,510,072 - SM_b20707 0.76 +0.3 1,510,105 + SM_b20707 0.79 -0.0 1,510,106 - SM_b20707 0.79 +0.4 1,510,608 + SM_b20708 0.43 -0.2 1,510,651 - SM_b20708 0.50 -0.9 1,510,651 - SM_b20708 0.50 -0.6 1,510,654 + SM_b20708 0.51 -0.9 1,510,655 - SM_b20708 0.51 -0.9 1,510,655 - SM_b20708 0.51 +0.5 1,510,655 - SM_b20708 0.51 -1.4 1,510,914 + +0.2 1,510,978 + -0.6 1,510,978 + +2.4 1,511,052 - +1.4 1,511,173 + +0.0 1,511,241 + SM_b20709 0.19 -0.6 1,511,342 + SM_b20709 0.37 +0.8 1,511,342 + SM_b20709 0.37 +0.6 1,511,342 + SM_b20709 0.37 +0.1 1,511,343 - SM_b20709 0.37 +1.3 1,511,343 - SM_b20709 0.37 +0.0 1,511,343 - SM_b20709 0.37 +0.6 1,511,343 - SM_b20709 0.37 +0.1 1,511,343 - SM_b20709 0.37 -0.3 1,511,349 - SM_b20709 0.38 +0.1 1,511,349 - SM_b20709 0.38 +1.4 1,511,349 - SM_b20709 0.38 +0.0 1,511,349 - SM_b20709 0.38 -0.1 1,511,439 + SM_b20709 0.54 -0.1 1,511,481 + SM_b20709 0.62 +0.1 1,511,481 + SM_b20709 0.62 +0.2 1,511,482 - SM_b20709 0.62 -0.0 1,511,482 - SM_b20709 0.62 -0.2 1,511,896 + +1.4
Or see this region's nucleotide sequence