Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1878

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,147,802	-				-0.8
2,147,802	-				-0.4
2,147,802	-				-1.2
2,147,802	-				-1.5
2,147,802	-				-1.5
2,147,802	-				-1.5
2,147,802	-				-0.7
2,147,802	-				+0.0
2,147,802	-				+0.4
2,147,802	-				-1.2
2,147,803	+				-0.0
2,147,803	+				-0.4
2,147,803	+				-1.0
2,147,803	+				+1.6
2,147,803	+				+1.6
2,147,803	+				+0.6
2,147,804	-				-1.5
2,147,804	-				-0.3
2,147,804	-				-1.4
2,147,804	-				-2.2
2,147,804	-				-0.7
2,147,804	-				-0.8
2,147,804	-				+0.0
2,147,804	-				-0.4
2,147,804	-				-1.0
2,147,804	-				+0.3
2,147,804	-				+0.4
2,147,804	-				+1.6
2,147,804	-				+0.3
2,147,804	-				+0.5
2,147,804	-				-1.5
2,147,804	-				+0.0
2,147,804	-				+0.3
2,147,804	-				-0.4
2,147,804	-				+0.4
2,147,804	-				-2.0
2,147,804	-				-1.0
2,147,804	-				-1.2
2,147,804	-				-2.1
2,147,804	-				-0.4
2,147,804	-				-2.0
2,147,804	-				+0.6
2,147,804	-				-1.2
2,147,804	-				-1.2
2,147,804	-				+0.3
2,147,804	-				-1.7
2,147,804	-				-1.5
2,147,804	-				-1.2
2,147,804	-				-0.6
2,147,804	-				-0.3
2,147,804	-				-0.8
2,147,804	-				-1.2
2,147,804	-				-1.4
2,147,804	-				+0.6
2,147,804	-				-0.7
2,147,804	-				+0.0
2,147,804	-				-0.5
2,147,804	-				-1.2
2,147,804	-				+1.3
2,147,804	-				+0.6
2,147,804	-				-1.5
2,147,804	-				-2.5
2,147,804	-				-2.1
2,147,804	-				+0.0
2,147,804	-				-0.1
2,147,804	-				+0.6
2,147,804	-				+0.0
2,147,804	-				-1.1
2,147,804	-				-1.2
2,147,804	-				-0.0
2,147,804	-				-2.0
2,147,804	-				+2.2
2,147,804	-				-0.1
2,147,804	-				-0.4
2,147,804	-				+0.3
2,147,804	-				-0.7
2,147,804	-				-1.5
2,147,805	+				-0.2
2,147,805	+				+0.6
2,147,805	+				-1.0
2,147,805	+				-1.2
2,147,806	-				-0.7
2,147,806	-				-0.7
2,147,806	-				-1.0
2,147,806	-				+0.0
2,147,806	-				-0.7
2,147,806	-				+1.2
2,147,806	-				-1.7
2,147,806	-				-1.2
2,147,806	-				-0.5
2,147,806	-				-0.2
2,147,806	-				+1.2
2,147,806	-				-2.2
2,147,806	-				-0.2
2,147,806	-				-1.4
2,147,806	-				+0.9
2,147,806	-				+1.2
2,147,806	-				-0.2
2,147,806	-				+1.6
2,147,806	-				-2.2
2,147,806	-				+1.0
2,147,841	+				+1.0
2,147,841	+				+0.5
2,147,841	+				-0.7
2,147,841	+				+1.0
2,147,841	+				+1.0
2,147,841	+				-0.9
2,147,842	-				-1.2
2,147,842	-				-0.7
2,147,842	-				-1.0
2,147,842	-				+0.3
2,147,842	-				-1.7
2,147,842	-				-2.1
2,147,882	+				-2.3
2,147,883	-				-1.5
2,147,883	-				-1.1
2,147,883	-				-1.0
2,147,883	-				-1.7
2,147,883	-				-1.0
2,147,883	-				-1.5
2,147,883	-				-1.5
2,147,920	+				-0.6
2,147,920	+				+0.6
2,147,920	+				-0.3
2,147,920	+				-0.4
2,147,921	-				-0.7
2,147,921	-				-0.7
2,147,921	-				-0.4
2,147,921	-				-1.0
2,147,921	-				-2.2
2,147,921	-				+0.6
2,147,937	+				-0.8
2,147,938	-				-2.0
2,147,963	+				-0.9
2,147,964	-				+0.3
2,147,964	-				+1.1
2,147,964	-				+0.0
2,147,964	-				-1.4
2,147,978	-				-0.7
2,147,999	+				-2.2
2,147,999	+				+2.6
2,147,999	+				+0.0
2,147,999	+				-1.0
2,148,000	-				+0.0
2,148,000	-				+0.8
2,148,000	-				-0.4
2,148,000	-				+0.0
2,148,000	-				-0.4
2,148,000	-				+0.0
2,148,000	-				-2.5
2,148,000	-				+0.9
2,148,000	-				-0.8
2,148,000	-				-1.8
2,148,000	-				+0.0
2,148,000	-				-0.4
2,148,000	-				+0.4
2,148,000	-				-0.4
2,148,000	-				-2.4
2,148,037	-				-0.7
2,148,037	-				-0.2
2,148,037	-				-1.6
2,148,037	-				-1.7
2,148,037	-				-1.2
2,148,037	-				+1.4
2,148,094	+				-0.2
2,148,095	-				+0.0
2,148,095	-				+0.6
2,148,095	-				-1.5
2,148,095	-				+0.0
2,148,180	-				+0.0
2,148,209	+				-0.5
2,148,210	-				+0.0
2,148,210	-				-1.5
2,148,210	-				-0.4
2,148,210	-				-1.0
2,148,210	-				-1.7
2,148,222	+				-0.8
2,148,222	+				+0.3
2,148,222	+				-0.0
2,148,223	-				-2.1
2,148,223	-				-2.0
2,148,238	-				+0.6
2,148,243	+				+0.0
2,148,243	+				-1.2
2,148,243	+				-0.7
2,148,243	+				-0.4
2,148,243	+				+0.3
2,148,243	+				-0.6
2,148,243	+				+0.0
2,148,243	+				-1.4
2,148,243	+				+0.3
2,148,243	+				+0.0
2,148,244	-				-1.7
2,148,244	-				-1.7
2,148,244	-				-0.8
2,148,244	-				-0.4
2,148,252	+				-1.4
2,148,252	+				-1.2
2,148,252	+				-0.7
2,148,253	-				+0.4
2,148,253	-				-1.2
2,148,306	-				-0.4
2,148,355	+		Pf1N1B4_1878	0.16	+0.8
2,148,355	+		Pf1N1B4_1878	0.16	-0.7
2,148,355	+		Pf1N1B4_1878	0.16	-1.7
2,148,355	+				-1.8
2,148,355	+		Pf1N1B4_1878	0.16	-2.5
2,148,355	+		Pf1N1B4_1878	0.16	+0.6
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-1.2
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-2.0
2,148,355	+		Pf1N1B4_1878	0.16	-1.8
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.7
2,148,355	+		Pf1N1B4_1878	0.16	-0.2
2,148,355	+		Pf1N1B4_1878	0.16	+0.0
2,148,355	+		Pf1N1B4_1878	0.16	-1.5
2,148,355	+		Pf1N1B4_1878	0.16	+0.4
2,148,355	+		Pf1N1B4_1878	0.16	-2.3
2,148,355	+		Pf1N1B4_1878	0.16	-0.4
2,148,355	+		Pf1N1B4_1878	0.16	-1.5
2,148,355	+		Pf1N1B4_1878	0.16	+0.6
2,148,355	+		Pf1N1B4_1878	0.16	-2.1
2,148,355	+		Pf1N1B4_1878	0.16	-1.5
2,148,355	+		Pf1N1B4_1878	0.16	-1.7
2,148,355	+		Pf1N1B4_1878	0.16	-1.1
2,148,355	+		Pf1N1B4_1878	0.16	-1.0
2,148,355	+		Pf1N1B4_1878	0.16	-0.7
2,148,355	+		Pf1N1B4_1878	0.16	-2.4
2,148,355	+		Pf1N1B4_1878	0.16	-2.6
2,148,355	+		Pf1N1B4_1878	0.16	-0.8
2,148,356	-		Pf1N1B4_1878	0.16	+0.5
2,148,356	-		Pf1N1B4_1878	0.16	+2.6
2,148,356	-		Pf1N1B4_1878	0.16	-0.2
2,148,356	-		Pf1N1B4_1878	0.16	-1.7
2,148,356	-		Pf1N1B4_1878	0.16	-0.1
2,148,356	-		Pf1N1B4_1878	0.16	+0.0
2,148,356	-		Pf1N1B4_1878	0.16	+0.6
2,148,356	-		Pf1N1B4_1878	0.16	-0.4
2,148,356	-		Pf1N1B4_1878	0.16	-0.0
2,148,356	-		Pf1N1B4_1878	0.16	+0.6
2,148,356	-		Pf1N1B4_1878	0.16	-0.4
2,148,356	-		Pf1N1B4_1878	0.16	-0.8
2,148,356	-		Pf1N1B4_1878	0.16	-1.2
2,148,356	-		Pf1N1B4_1878	0.16	+0.0
2,148,356	-		Pf1N1B4_1878	0.16	-0.4
2,148,356	-		Pf1N1B4_1878	0.16	-1.4
2,148,356	-		Pf1N1B4_1878	0.16	+1.9
2,148,356	-		Pf1N1B4_1878	0.16	-1.0
2,148,356	-		Pf1N1B4_1878	0.16	+0.6
2,148,356	-		Pf1N1B4_1878	0.16	+0.6
2,148,356	-		Pf1N1B4_1878	0.16	-1.4
2,148,356	-		Pf1N1B4_1878	0.16	+0.9
2,148,386	+		Pf1N1B4_1878	0.21	-0.8
2,148,386	+		Pf1N1B4_1878	0.21	-0.7
2,148,386	+		Pf1N1B4_1878	0.21	-0.5
2,148,386	+		Pf1N1B4_1878	0.21	-0.2
2,148,386	+		Pf1N1B4_1878	0.21	-1.0
2,148,386	+		Pf1N1B4_1878	0.21	+0.6
2,148,387	-		Pf1N1B4_1878	0.21	+0.6
2,148,387	-		Pf1N1B4_1878	0.21	-0.2
2,148,387	-		Pf1N1B4_1878	0.21	-1.2
2,148,398	+		Pf1N1B4_1878	0.23	+0.6
2,148,399	-		Pf1N1B4_1878	0.23	-1.0
2,148,432	+		Pf1N1B4_1878	0.28	-0.7
2,148,433	-		Pf1N1B4_1878	0.29	-0.4
2,148,433	-		Pf1N1B4_1878	0.29	-3.5
2,148,478	+		Pf1N1B4_1878	0.36	-0.5
2,148,478	+				-0.4
2,148,479	-		Pf1N1B4_1878	0.36	-1.0
2,148,530	+		Pf1N1B4_1878	0.44	-1.2
2,148,530	+		Pf1N1B4_1878	0.44	-0.0
2,148,530	+		Pf1N1B4_1878	0.44	-0.8
2,148,530	+		Pf1N1B4_1878	0.44	-0.5
2,148,530	+		Pf1N1B4_1878	0.44	-2.3
2,148,531	-		Pf1N1B4_1878	0.45	-1.0
2,148,531	-		Pf1N1B4_1878	0.45	+0.0
2,148,531	-		Pf1N1B4_1878	0.45	-1.0
2,148,540	+		Pf1N1B4_1878	0.46	-0.7
2,148,540	+		Pf1N1B4_1878	0.46	-1.8
2,148,540	+		Pf1N1B4_1878	0.46	-0.8
2,148,540	+		Pf1N1B4_1878	0.46	-1.7
2,148,540	+		Pf1N1B4_1878	0.46	-2.1
2,148,541	-		Pf1N1B4_1878	0.46	+0.6
2,148,541	-		Pf1N1B4_1878	0.46	-0.4
2,148,541	-		Pf1N1B4_1878	0.46	-0.4
2,148,541	-		Pf1N1B4_1878	0.46	-2.3
2,148,723	+		Pf1N1B4_1878	0.76	-0.7
2,148,723	+		Pf1N1B4_1878	0.76	-0.4
2,148,723	+		Pf1N1B4_1878	0.76	-0.5
2,148,723	+		Pf1N1B4_1878	0.76	-1.0
2,148,723	+		Pf1N1B4_1878	0.76	-2.1
2,148,723	+		Pf1N1B4_1878	0.76	-0.3
2,148,723	+		Pf1N1B4_1878	0.76	-1.2
2,148,723	+		Pf1N1B4_1878	0.76	-0.7
2,148,724	-		Pf1N1B4_1878	0.76	-1.2
2,148,724	-		Pf1N1B4_1878	0.76	-1.5
2,148,724	-		Pf1N1B4_1878	0.76	-1.3
2,148,724	-		Pf1N1B4_1878	0.76	-0.4
2,148,830	+				-1.4
2,148,831	-				+0.2
2,148,831	-				+1.6
2,148,831	-				-1.2
2,148,849	+				+0.4
2,148,849	+				-1.0
2,148,849	+				-0.3
2,148,849	+				-2.1
2,148,849	+				-0.7
2,148,849	+				-1.5
2,148,849	+				+0.9
2,148,849	+				-2.0
2,148,849	+				+0.0
2,148,849	+				-0.4
2,148,849	+				-0.1
2,148,849	+				-0.7
2,148,849	+				-0.7
2,148,849	+				+1.6
2,148,849	+				-2.0
2,148,849	+				-1.2
2,148,849	+				-1.5
2,148,849	+				-0.7
2,148,849	+				-0.8
2,148,849	+				-0.4
2,148,849	+				-1.0
2,148,849	+				-1.0
2,148,849	+				-2.5
2,148,849	+				+0.0
2,148,849	+				-2.3
2,148,849	+				-2.4
2,148,849	+				+0.0
2,148,849	+				+0.0
2,148,849	+				-0.1
2,148,849	+				-1.2
2,148,849	+				+0.6
2,148,849	+				-0.4
2,148,850	-				-1.8
2,148,850	-				-1.2
2,148,850	-				+0.0
2,148,850	-				+1.6
2,148,850	-				-0.1
2,148,850	-				-0.7
2,148,850	-				+0.0
2,148,850	-				+0.0
2,148,850	-				+0.6
2,148,850	-				-0.1
2,148,850	-				+0.3
2,148,850	-				+0.0
2,148,850	-				+0.5
2,148,850	-				+0.3
2,148,850	-				-1.0
2,148,850	-				-2.2
2,148,850	-				-1.4
2,148,850	-				+1.3
2,148,850	-				+0.0
2,148,850	-				-1.0
2,148,850	-				+0.2
2,148,850	-				-0.4
2,148,850	-				-1.0
2,148,850	-				-1.0
2,148,850	-				-2.7
2,148,850	-				-0.4
2,148,850	-				-1.2
2,148,850	-				-1.0
2,148,850	-				-1.3
2,148,850	-				+0.6
2,148,850	-				-2.8
2,148,850	-				-1.8
2,148,850	-				+0.0
2,148,851	+				+0.6
2,148,851	+				-1.7
2,148,851	+				-0.7
2,148,851	+				-3.5
2,148,851	+				-0.4
2,148,851	+				-3.1
2,148,851	+				-1.2
2,148,851	+				-1.7
2,148,851	+				-0.5
2,148,851	+				+0.5
2,148,851	+				-1.4
2,148,851	+				-2.6
2,148,851	+				-0.5
2,148,851	+				-0.7
2,148,851	+				+0.0
2,148,851	+				-0.2
2,148,851	+				-1.4
2,148,852	-				+0.6
2,148,852	-				-1.0
2,148,852	-				-1.8
2,148,852	-				+0.0
2,148,852	-				-1.4
2,148,852	-				-1.5
2,148,852	-				+0.0
2,148,852	-				+1.0
2,148,852	-				-1.0
2,148,852	-				-2.4
2,148,852	-				+1.6
2,148,852	-				+0.6
2,148,852	-				+0.4
2,148,891	+				+1.2
2,148,891	+				+0.4
2,148,899	+				-0.1
2,148,899	+				+0.6
2,148,899	+				-0.5
2,148,899	+				+0.8
2,148,899	+				+0.1
2,148,899	+				+0.2
2,148,899	+				+0.2
2,148,899	+				-1.0
2,148,899	+				+0.7
2,148,899	+				-1.2
2,148,899	+				-1.4
2,148,899	+				-1.4
2,148,899	+				+0.8
2,148,899	+				+0.3
2,148,899	+				-0.2
2,148,899	+				+0.0
2,148,899	+				-1.1
2,148,899	+				-1.4
2,148,899	+				+0.2
2,148,899	+				-1.0
2,148,899	+				+1.6
2,148,899	+				-1.1
2,148,899	+				+0.0
2,148,899	+				-1.7
2,148,899	+				+0.6
2,148,899	+				+0.6
2,148,899	+				+0.2
2,148,899	+				-0.8
2,148,899	+				+0.0
2,148,899	+				+1.6
2,148,899	+				-0.4
2,148,899	+				+0.0
2,148,899	+				+0.9
2,148,899	+				-1.4
2,148,899	+				+0.6
2,148,899	+				+0.3
2,148,899	+				-0.3
2,148,899	+				+0.2
2,148,899	+				+0.2
2,148,899	+				+0.0
2,148,900	-				+0.4
2,148,900	-				-0.2
2,148,900	-				+0.5
2,148,900	-				+0.6
2,148,900	-				+0.6
2,148,900	-				-1.5
2,148,900	-				-0.6
2,148,900	-				-0.0
2,148,900	-				-0.3
2,148,900	-				+1.6
2,148,900	-				+0.9
2,148,900	-				+0.8
2,148,900	-				+0.2
2,148,900	-				-0.7
2,148,900	-				+0.3
2,148,900	-				-1.0
2,148,916	+				-0.5
2,148,928	-				+0.4
2,148,946	+				+0.4
2,148,946	+				+0.8
2,148,946	+				-0.4
2,148,946	+				-0.2
2,148,946	+				-0.4
2,148,946	+				-0.2
2,148,947	-				-0.8
2,148,947	-				-0.3
2,148,990	+				-0.8
2,148,990	+				-0.4
2,148,995	+				+0.4
2,148,996	-				+0.2
2,148,996	-				+1.0
2,148,996	-				+0.4
2,148,996	-				+0.0
2,149,062	+				+0.0
2,149,062	+				-0.4
2,149,481	-		Pf1N1B4_1879	0.64	-0.1
2,149,707	+				-1.4
2,149,707	+				-0.6
2,149,707	+				-1.4
2,149,708	-				-0.4
2,149,708	-				+0.1
2,149,852	+		Pf1N1B4_1880	0.15	-0.4