Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1857

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,127,411	+		Pf1N1B4_1854	0.86	-0.7
2,127,411	+		Pf1N1B4_1854	0.86	+0.7
2,127,411	+		Pf1N1B4_1854	0.86	-1.2
2,127,411	+		Pf1N1B4_1854	0.86	+0.0
2,127,412	-		Pf1N1B4_1854	0.87	+0.6
2,127,412	-		Pf1N1B4_1854	0.87	+2.2
2,127,642	+		Pf1N1B4_1855	0.13	-0.8
2,127,642	+		Pf1N1B4_1855	0.13	-0.4
2,127,642	+		Pf1N1B4_1855	0.13	+0.6
2,127,642	+		Pf1N1B4_1855	0.13	-0.6
2,127,642	+		Pf1N1B4_1855	0.13	-1.7
2,127,642	+		Pf1N1B4_1855	0.13	-0.0
2,127,642	+		Pf1N1B4_1855	0.13	-0.1
2,127,700	+		Pf1N1B4_1855	0.55	-1.1
2,127,700	+		Pf1N1B4_1855	0.55	+0.2
2,127,700	+		Pf1N1B4_1855	0.55	-0.4
2,127,700	+		Pf1N1B4_1855	0.55	+0.2
2,127,700	+		Pf1N1B4_1855	0.55	+1.1
2,127,700	+		Pf1N1B4_1855	0.55	-0.2
2,127,701	-		Pf1N1B4_1855	0.55	+0.2
2,127,701	-		Pf1N1B4_1855	0.55	+0.6
2,127,849	+		Pf1N1B4_1856	0.17	+0.0
2,127,849	+		Pf1N1B4_1856	0.17	-1.0
2,127,849	+		Pf1N1B4_1856	0.17	-0.7
2,127,849	+		Pf1N1B4_1856	0.17	-0.5
2,127,850	-		Pf1N1B4_1856	0.17	+1.2
2,127,850	-		Pf1N1B4_1856	0.17	+0.0
2,127,850	-		Pf1N1B4_1856	0.17	+0.3
2,127,850	-		Pf1N1B4_1856	0.17	+1.2
2,127,850	-		Pf1N1B4_1856	0.17	+0.3
2,127,900	+		Pf1N1B4_1856	0.26	+0.8
2,127,900	+		Pf1N1B4_1856	0.26	-0.5
2,127,900	+		Pf1N1B4_1856	0.26	-0.7
2,127,901	-		Pf1N1B4_1856	0.26	-2.3
2,127,987	+				+1.6
2,127,987	+		Pf1N1B4_1856	0.41	+0.5
2,128,119	+		Pf1N1B4_1856	0.65	-0.2
2,128,119	+		Pf1N1B4_1856	0.65	-1.4
2,128,120	-		Pf1N1B4_1856	0.65	+0.6
2,128,248	+		Pf1N1B4_1856	0.88	-0.3
2,128,248	+		Pf1N1B4_1856	0.88	-0.7
2,128,318	+				+0.2
2,128,344	+				+0.2
2,128,344	+				-1.0
2,128,344	+				+0.9
2,128,344	+				-0.4
2,128,344	+				-0.8
2,128,344	+				+1.0
2,128,344	+				+0.0
2,128,344	+				+0.2
2,128,344	+				+0.4
2,128,344	+				-0.4
2,128,344	+				+0.5
2,128,344	+				-0.9
2,128,345	-				+0.8
2,128,345	-				+0.9
2,128,345	-				+0.7
2,128,345	-				+1.6
2,128,345	-				+0.5
2,128,345	-				-1.4
2,128,345	-				-0.8
2,128,345	-				+0.2
2,128,365	+				+1.4
2,128,365	+				+0.9
2,128,365	+				+0.5
2,128,365	+				-0.2
2,128,366	-				-0.4
2,128,366	-				+0.3
2,128,366	-				+0.0
2,128,366	-				+0.3
2,128,366	-				-1.8
2,128,366	-				+0.2
2,128,366	-				-0.2
2,128,368	+				-0.5
2,128,368	+				+1.6
2,128,368	+				-0.7
2,128,368	+				-0.5
2,128,368	+				+1.2
2,128,368	+				+0.9
2,128,368	+				+0.0
2,128,369	-				+0.3
2,128,369	-				-1.1
2,128,369	-				-0.1
2,128,369	-				+1.6
2,128,369	-				-1.3
2,128,369	-				-1.0
2,128,521	+		Pf1N1B4_1857	0.20	-0.1
2,128,521	+		Pf1N1B4_1857	0.20	+0.8
2,128,521	+		Pf1N1B4_1857	0.20	-0.8
2,128,521	+		Pf1N1B4_1857	0.20	+0.3
2,128,521	+		Pf1N1B4_1857	0.20	+1.3
2,128,521	+		Pf1N1B4_1857	0.20	-0.4
2,128,521	+		Pf1N1B4_1857	0.20	-0.2
2,128,521	+		Pf1N1B4_1857	0.20	+1.0
2,128,521	+		Pf1N1B4_1857	0.20	-0.4
2,128,521	+		Pf1N1B4_1857	0.20	+1.6
2,128,521	+		Pf1N1B4_1857	0.20	-0.7
2,128,522	-		Pf1N1B4_1857	0.20	-0.7
2,128,522	-		Pf1N1B4_1857	0.20	+0.3
2,128,522	-				+0.6
2,128,575	+		Pf1N1B4_1857	0.26	+1.2
2,128,575	+		Pf1N1B4_1857	0.26	-0.2
2,128,575	+		Pf1N1B4_1857	0.26	+0.8
2,128,575	+		Pf1N1B4_1857	0.26	-0.8
2,128,575	+		Pf1N1B4_1857	0.26	-0.6
2,128,575	+		Pf1N1B4_1857	0.26	-0.6
2,128,576	-		Pf1N1B4_1857	0.26	+0.3
2,128,576	-		Pf1N1B4_1857	0.26	+0.3
2,128,576	-		Pf1N1B4_1857	0.26	+1.6
2,128,671	+		Pf1N1B4_1857	0.36	+0.2
2,128,671	+		Pf1N1B4_1857	0.36	+0.0
2,128,672	-		Pf1N1B4_1857	0.37	+0.6
2,128,672	-		Pf1N1B4_1857	0.37	-0.7
2,128,672	-		Pf1N1B4_1857	0.37	+0.6
2,128,983	+		Pf1N1B4_1857	0.72	+0.6
2,128,995	+		Pf1N1B4_1857	0.73	-0.1
2,129,031	+		Pf1N1B4_1857	0.77	-0.4
2,129,031	+		Pf1N1B4_1857	0.77	-0.7
2,129,031	+		Pf1N1B4_1857	0.77	+0.0
2,129,031	+		Pf1N1B4_1857	0.77	+0.6
2,129,031	+		Pf1N1B4_1857	0.77	+0.8
2,129,031	+		Pf1N1B4_1857	0.77	+2.2
2,129,031	+		Pf1N1B4_1857	0.77	-0.4
2,129,031	+		Pf1N1B4_1857	0.77	+0.2
2,129,031	+		Pf1N1B4_1857	0.77	-0.7
2,129,031	+		Pf1N1B4_1857	0.77	+1.0
2,129,031	+		Pf1N1B4_1857	0.77	+0.2
2,129,031	+		Pf1N1B4_1857	0.77	-0.1
2,129,031	+		Pf1N1B4_1857	0.77	-0.1
2,129,031	+		Pf1N1B4_1857	0.77	-0.5
2,129,031	+		Pf1N1B4_1857	0.77	+1.3
2,129,031	+		Pf1N1B4_1857	0.77	+1.3
2,129,031	+		Pf1N1B4_1857	0.77	-0.5
2,129,031	+		Pf1N1B4_1857	0.77	+1.6
2,129,032	-		Pf1N1B4_1857	0.77	-0.7
2,129,032	-		Pf1N1B4_1857	0.77	+0.6
2,129,032	-		Pf1N1B4_1857	0.77	+0.6
2,129,032	-		Pf1N1B4_1857	0.77	+0.2
2,129,032	-		Pf1N1B4_1857	0.77	-0.7
2,129,032	-		Pf1N1B4_1857	0.77	-1.2
2,129,032	-		Pf1N1B4_1857	0.77	+1.2
2,129,032	-		Pf1N1B4_1857	0.77	-0.5
2,129,032	-		Pf1N1B4_1857	0.77	+0.6
2,129,032	-		Pf1N1B4_1857	0.77	+2.2
2,129,032	-		Pf1N1B4_1857	0.77	-0.8
2,129,032	-				+0.6
2,129,078	-		Pf1N1B4_1857	0.82	+0.2
2,129,078	-		Pf1N1B4_1857	0.82	+2.2
2,129,223	+				+0.9
2,129,223	+				+1.5
2,129,223	+				-0.4
2,129,223	+				-1.3
2,129,223	+				+0.6
2,129,223	+				-0.2
2,129,223	+				-1.2
2,129,223	+				-0.7
2,129,224	-				-3.2
2,129,224	-				+0.5
2,129,224	-				-0.1
2,129,224	-				-1.4
2,129,224	-				+0.3
2,129,252	+				+0.0
2,129,252	+				+0.3
2,129,253	-				-0.4
2,129,253	-				-0.4
2,129,253	-				-0.7
2,129,253	-				+0.0
2,129,488	+				-0.5
2,129,488	+				+1.6
2,129,488	+				+0.0
2,129,489	-				+0.0
2,129,489	-				-0.0
2,129,489	-				+0.6
2,129,489	-				+0.2
2,129,489	-				-0.5
2,129,490	+				+0.4
2,129,490	+				+1.0
2,129,490	+				-2.4
2,129,490	+				+0.8
2,129,490	+				+0.6
2,129,490	+				-0.5
2,129,490	+				+1.2
2,129,490	+				+0.1
2,129,490	+				-0.4
2,129,490	+				-0.7
2,129,490	+				+0.8
2,129,490	+				+2.0
2,129,490	+				+1.3
2,129,490	+				+0.6
2,129,490	+				+0.4
2,129,490	+				-0.1
2,129,490	+				+1.6
2,129,490	+				-1.2
2,129,490	+				+2.0
2,129,490	+				+0.3
2,129,490	+				-0.5
2,129,490	+				+0.2
2,129,490	+				+0.5
2,129,490	+				-0.2
2,129,490	+				-0.1
2,129,490	+				+0.3
2,129,490	+				-0.2
2,129,490	+				-0.6
2,129,490	+				+1.0
2,129,490	+				-0.2
2,129,490	+				+0.2
2,129,490	+				+0.3
2,129,490	+				-2.1
2,129,490	+				-0.1
2,129,490	+				-2.0
2,129,490	+				-1.7
2,129,490	+				+0.0
2,129,490	+				+1.0
2,129,490	+				+0.1
2,129,490	+				+1.6
2,129,490	+				-0.8
2,129,491	-				+1.1
2,129,491	-				-0.4
2,129,491	-				-1.2
2,129,491	-				-1.0
2,129,491	-				+0.0
2,129,491	-				+0.3
2,129,491	-				-0.5
2,129,491	-				+0.9
2,129,491	-				+0.3
2,129,491	-				-0.0
2,129,491	-				+0.9
2,129,491	-				+0.3
2,129,491	-				+1.6
2,129,491	-				-1.2
2,129,491	-				+0.3
2,129,491	-				-1.2
2,129,491	-				-0.5
2,129,491	-				-1.0
2,129,491	-				+0.3
2,129,491	-				+0.5
2,129,491	-				-0.4
2,129,491	-				+0.6
2,129,491	-				+0.2
2,129,494	+				-1.7
2,129,647	+		Pf1N1B4_1859	0.17	-0.5
2,129,648	-		Pf1N1B4_1859	0.17	+0.6
2,129,648	-				+0.6
2,129,648	-		Pf1N1B4_1859	0.17	-0.2
2,129,938	+		Pf1N1B4_1859	0.56	+1.6
2,129,938	+		Pf1N1B4_1859	0.56	-0.3
2,129,938	+		Pf1N1B4_1859	0.56	-0.8
2,129,938	+		Pf1N1B4_1859	0.56	+0.4
2,129,938	+		Pf1N1B4_1859	0.56	+1.0
2,129,938	+		Pf1N1B4_1859	0.56	+1.1
2,129,938	+		Pf1N1B4_1859	0.56	-0.5
2,129,938	+		Pf1N1B4_1859	0.56	+0.3
2,129,939	-		Pf1N1B4_1859	0.56	-1.5
2,129,939	-		Pf1N1B4_1859	0.56	-0.3
2,129,939	-		Pf1N1B4_1859	0.56	-0.3
2,129,939	-		Pf1N1B4_1859	0.56	-0.2
2,129,939	-		Pf1N1B4_1859	0.56	-1.2
2,129,939	-		Pf1N1B4_1859	0.56	+0.9
2,129,939	-		Pf1N1B4_1859	0.56	+0.8
2,129,939	-		Pf1N1B4_1859	0.56	-0.3
2,130,069	-		Pf1N1B4_1859	0.74	+0.4
2,130,094	+		Pf1N1B4_1859	0.77	+0.2
2,130,095	-		Pf1N1B4_1859	0.77	+2.0
2,130,145	+		Pf1N1B4_1859	0.84	+0.9
2,130,145	+		Pf1N1B4_1859	0.84	-1.3
2,130,145	+		Pf1N1B4_1859	0.84	+0.7
2,130,145	+		Pf1N1B4_1859	0.84	-1.5
2,130,145	+		Pf1N1B4_1859	0.84	-1.7
2,130,146	-		Pf1N1B4_1859	0.84	+0.0
2,130,190	+		Pf1N1B4_1859	0.90	-0.9
2,130,190	+		Pf1N1B4_1859	0.90	-0.9
2,130,190	+		Pf1N1B4_1859	0.90	+0.6
2,130,190	+		Pf1N1B4_1859	0.90	-0.7
2,130,190	+		Pf1N1B4_1859	0.90	+0.0
2,130,190	+		Pf1N1B4_1859	0.90	+2.0
2,130,191	-				-3.1
2,130,191	-				+0.2
2,130,196	+				-0.2
2,130,196	+				-0.0
2,130,196	+				-1.1
2,130,196	+				-0.4
2,130,196	+				-1.5
2,130,196	+				+1.6
2,130,196	+				-0.1
2,130,197	-				-1.2
2,130,197	-				-0.6
2,130,197	-				+0.8
2,130,228	+				+0.4
2,130,229	-				+0.2
2,130,229	-				-0.1
2,130,229	-				-0.6