Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02729

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
2,890,551	+		CCNA_02727	0.52	-1.8
2,890,568	+		CCNA_02727	0.54	+0.3
2,890,575	+		CCNA_02727	0.55	+1.5
2,890,646	+		CCNA_02727	0.64	-0.5
2,890,668	+		CCNA_02727	0.67	-0.5
2,890,668	+		CCNA_02727	0.67	+0.5
2,890,671	-		CCNA_02727	0.67	-0.8
2,890,676	-		CCNA_02727	0.68	-0.8
2,890,701	+		CCNA_02727	0.71	+1.3
2,890,706	+		CCNA_02727	0.71	+0.8
2,890,709	-		CCNA_02727	0.72	-1.9
2,890,709	-		CCNA_02727	0.72	-1.5
2,890,709	-		CCNA_02727	0.72	-1.3
2,890,709	-		CCNA_02727	0.72	-1.4
2,890,714	-		CCNA_02727	0.72	-0.7
2,890,722	+		CCNA_02727	0.73	-0.6
2,890,724	+		CCNA_02727	0.74	+1.2
2,890,780	+		CCNA_02727	0.81	+0.5
2,890,788	-		CCNA_02727	0.82	-1.0
2,890,788	-		CCNA_02727	0.82	-0.7
2,890,788	-		CCNA_02727	0.82	+0.5
2,890,805	-		CCNA_02727	0.84	-0.2
2,890,848	+		CCNA_02727	0.89	+1.0
2,890,848	+		CCNA_02727	0.89	+0.9
2,890,848	+		CCNA_02727	0.89	-0.1
2,890,848	+		CCNA_02727	0.89	+0.2
2,890,856	-				-0.7
2,890,856	-				-0.4
2,890,913	+				+0.7
2,890,933	+				+0.3
2,890,967	+				+0.4
2,890,967	+				-0.1
2,890,967	+				+0.1
2,890,967	+				-0.5
2,890,972	+				+1.1
2,890,975	-				+0.2
2,890,975	-				+1.5
2,890,975	-				-0.7
2,890,975	-				-0.9
2,890,989	-				+0.5
2,890,991	-				+0.6
2,891,004	-				+0.5
2,891,073	+				+0.5
2,891,084	+				-1.1
2,891,088	-				-1.0
2,891,143	+		CCNA_02728	0.12	+2.0
2,891,143	+		CCNA_02728	0.12	+1.6
2,891,146	-		CCNA_02728	0.13	-1.0
2,891,148	+		CCNA_02728	0.13	+0.6
2,891,151	-		CCNA_02728	0.14	+1.1
2,891,166	+		CCNA_02728	0.19	+2.7
2,891,173	+		CCNA_02728	0.22	+2.1
2,891,196	+		CCNA_02728	0.29	+2.2
2,891,196	+		CCNA_02728	0.29	+2.0
2,891,196	+		CCNA_02728	0.29	+2.1
2,891,196	+		CCNA_02728	0.29	+2.1
2,891,196	+		CCNA_02728	0.29	+1.4
2,891,199	-		CCNA_02728	0.30	-0.8
2,891,204	-		CCNA_02728	0.32	+0.3
2,891,204	-		CCNA_02728	0.32	+0.8
2,891,204	-		CCNA_02728	0.32	-1.4
2,891,234	-		CCNA_02728	0.42	-0.2
2,891,274	+		CCNA_02728	0.55	+2.4
2,891,274	+		CCNA_02728	0.55	+2.2
2,891,305	+		CCNA_02728	0.65	+2.7
2,891,313	-		CCNA_02728	0.67	-0.5
2,891,313	-		CCNA_02728	0.67	-0.2
2,891,315	+		CCNA_02728	0.68	+3.2
2,891,315	+		CCNA_02728	0.68	+3.0
2,891,373	+		CCNA_02728	0.87	+2.7
2,891,382	+				+2.0
2,891,401	+				+2.6
2,891,464	+				+4.7
2,891,487	+				+1.0
2,891,495	-				+0.6
2,891,566	-				+2.0
2,891,578	-				+0.3
2,891,578	-				+3.1
2,891,580	+				+2.6
2,891,580	+				+2.6
2,891,597	+				+1.8
2,891,602	+				+2.1
2,891,602	+				+2.2
2,891,610	-				+1.4
2,891,624	+				+1.3
2,891,632	-				+2.5
2,891,638	-				+0.4
2,891,698	-				-0.1
2,891,717	+		CCNA_02729	0.10	+3.5
2,891,725	-		CCNA_02729	0.11	-1.2
2,891,761	-		CCNA_02729	0.13	-1.2
2,891,787	-		CCNA_02729	0.14	-1.3
2,891,812	-		CCNA_02729	0.15	+0.2
2,891,857	+		CCNA_02729	0.17	+2.1
2,891,857	+		CCNA_02729	0.17	+2.6
2,891,865	-		CCNA_02729	0.18	-0.4
2,891,870	-		CCNA_02729	0.18	+1.8
2,891,903	-		CCNA_02729	0.20	-0.1
2,891,905	+		CCNA_02729	0.20	+2.6
2,891,944	-		CCNA_02729	0.22	+0.7
2,891,944	-		CCNA_02729	0.22	+0.4
2,891,946	-		CCNA_02729	0.22	+1.8
2,891,972	+		CCNA_02729	0.23	+2.4
2,891,977	+		CCNA_02729	0.23	+2.4
2,891,977	+		CCNA_02729	0.23	+2.0
2,891,977	+		CCNA_02729	0.23	+2.6
2,891,980	-		CCNA_02729	0.24	-2.2
2,891,980	-		CCNA_02729	0.24	+1.2
2,891,985	-		CCNA_02729	0.24	+1.6
2,891,985	-		CCNA_02729	0.24	+1.2
2,891,985	-		CCNA_02729	0.24	+0.3
2,892,011	+		CCNA_02729	0.25	+2.3
2,892,036	-		CCNA_02729	0.26	+2.1
2,892,047	+		CCNA_02729	0.27	+2.1
2,892,074	+		CCNA_02729	0.28	+2.0
2,892,125	+		CCNA_02729	0.31	+1.3
2,892,169	-		CCNA_02729	0.33	+2.3
2,892,211	-		CCNA_02729	0.35	-0.0
2,892,287	+		CCNA_02729	0.39	+2.0
2,892,287	+		CCNA_02729	0.39	+1.6
2,892,287	+		CCNA_02729	0.39	+1.5
2,892,295	-		CCNA_02729	0.39	+1.2
2,892,295	-		CCNA_02729	0.39	-1.4
2,892,296	+		CCNA_02729	0.39	+2.0
2,892,340	+		CCNA_02729	0.42	+2.3
2,892,340	+		CCNA_02729	0.42	+3.7
2,892,360	-		CCNA_02729	0.43	+1.1
2,892,395	-		CCNA_02729	0.44	+2.7
2,892,412	-		CCNA_02729	0.45	+2.1
2,892,426	+		CCNA_02729	0.46	+2.3
2,892,431	+		CCNA_02729	0.46	+1.0
2,892,431	+		CCNA_02729	0.46	+1.1
2,892,434	-		CCNA_02729	0.46	+2.5
2,892,439	-		CCNA_02729	0.47	+2.6
2,892,439	-		CCNA_02729	0.47	+1.5
2,892,444	-		CCNA_02729	0.47	+2.2
2,892,446	+		CCNA_02729	0.47	+2.6
2,892,446	+		CCNA_02729	0.47	+1.9
2,892,446	+		CCNA_02729	0.47	+1.9
2,892,451	+		CCNA_02729	0.47	+1.5
2,892,454	-		CCNA_02729	0.47	+0.8
2,892,486	-		CCNA_02729	0.49	+1.1
2,892,486	-		CCNA_02729	0.49	+0.9
2,892,486	-		CCNA_02729	0.49	+2.1
2,892,498	-		CCNA_02729	0.50	+0.1
2,892,502	+		CCNA_02729	0.50	+2.1
2,892,735	+		CCNA_02729	0.61	+1.4
2,892,755	-		CCNA_02729	0.62	-0.4
2,892,762	+		CCNA_02729	0.63	+2.7
2,892,762	+		CCNA_02729	0.63	+1.7
2,892,772	+		CCNA_02729	0.63	+2.7
2,892,784	-		CCNA_02729	0.64	+0.1
2,892,803	-		CCNA_02729	0.65	+0.7
2,892,829	+		CCNA_02729	0.66	+3.3
2,892,829	+		CCNA_02729	0.66	+2.2
2,892,844	+		CCNA_02729	0.67	+2.6
2,892,847	+		CCNA_02729	0.67	+2.3
2,892,874	+		CCNA_02729	0.68	+1.8
2,892,932	+		CCNA_02729	0.71	+1.7
2,892,932	+		CCNA_02729	0.71	+2.3
2,893,012	-		CCNA_02729	0.75	+2.6
2,893,012	-		CCNA_02729	0.75	+1.6
2,893,012	-		CCNA_02729	0.75	-1.7
2,893,013	+		CCNA_02729	0.75	+2.5
2,893,030	+		CCNA_02729	0.76	+1.3
2,893,033	-				+2.7
2,893,038	-		CCNA_02729	0.77	+1.4
2,893,059	+		CCNA_02729	0.78	+1.3
2,893,077	+		CCNA_02729	0.78	+3.8
2,893,085	-		CCNA_02729	0.79	+0.8
2,893,092	+		CCNA_02729	0.79	+2.6
2,893,092	+		CCNA_02729	0.79	+2.9
2,893,092	+		CCNA_02729	0.79	+1.8
2,893,092	+		CCNA_02729	0.79	+1.9
2,893,100	-		CCNA_02729	0.80	+1.1
2,893,100	-		CCNA_02729	0.80	+1.8
2,893,100	-		CCNA_02729	0.80	+1.2
2,893,104	-		CCNA_02729	0.80	+1.4
2,893,110	-		CCNA_02729	0.80	+3.3
2,893,126	-		CCNA_02729	0.81	+1.5
2,893,164	+		CCNA_02729	0.83	+2.6
2,893,194	-		CCNA_02729	0.84	+1.5
2,893,211	-		CCNA_02729	0.85	-0.2
2,893,216	-		CCNA_02729	0.85	+1.2
2,893,225	+		CCNA_02729	0.86	+3.1
2,893,276	-		CCNA_02729	0.88	+0.3
2,893,302	+		CCNA_02729	0.90	+1.5
2,893,320	+				+3.1
2,893,320	+				+2.3
2,893,327	-				+0.4
2,893,330	+				+2.6
2,893,341	+				+2.5
2,893,347	-				+0.6
2,893,349	-				+0.2
2,893,357	-				-0.0
2,893,411	+				+2.6
2,893,420	-				-0.1
2,893,501	+				+2.3
2,893,503	+				+2.9
2,893,509	-				-0.3
2,893,531	-				+1.3
2,893,561	+				+2.3
2,893,578	+				+0.0
2,893,637	+		CCNA_02730	0.19	-0.2
2,893,692	+		CCNA_02730	0.27	+1.1
2,893,700	-		CCNA_02730	0.29	+0.1
2,893,700	-		CCNA_02730	0.29	-0.7
2,893,726	+		CCNA_02730	0.33	+0.4
2,893,736	-		CCNA_02730	0.34	-1.6
2,893,736	-		CCNA_02730	0.34	-1.8
2,893,749	+		CCNA_02730	0.36	+1.3
2,893,902	+		CCNA_02730	0.60	+0.5
2,893,944	+		CCNA_02730	0.66	+0.5
2,893,944	+		CCNA_02730	0.66	+2.7
2,893,944	+		CCNA_02730	0.66	-0.1
2,893,983	+		CCNA_02730	0.72	+0.3
2,893,991	-		CCNA_02730	0.74	-1.1
2,894,017	+		CCNA_02730	0.78	+1.1
2,894,025	-		CCNA_02730	0.79	+0.2
2,894,025	-		CCNA_02730	0.79	+0.3
2,894,025	-		CCNA_02730	0.79	-0.1
2,894,050	+		CCNA_02730	0.83	-0.5
2,894,085	-		CCNA_02730	0.88	-0.2
2,894,087	+		CCNA_02730	0.88	+2.6
2,894,180	+				-1.6
2,894,196	-				+2.2
2,894,252	+		CCNA_02731	0.14	+0.7
2,894,257	+		CCNA_02731	0.14	+0.9
2,894,260	-		CCNA_02731	0.15	+0.8
2,894,303	+		CCNA_02731	0.21	+0.9
2,894,314	-		CCNA_02731	0.23	+1.5
2,894,324	+		CCNA_02731	0.24	+0.4
2,894,324	+		CCNA_02731	0.24	+0.8
2,894,332	-		CCNA_02731	0.25	+0.1
2,894,332	-		CCNA_02731	0.25	+0.3
2,894,332	-		CCNA_02731	0.25	+0.7
2,894,363	+		CCNA_02731	0.30	-0.4
2,894,371	-		CCNA_02731	0.31	-1.1
2,894,373	+		CCNA_02731	0.31	+0.4
2,894,375	+		CCNA_02731	0.31	+0.7
2,894,381	-		CCNA_02731	0.32	+0.3
2,894,381	-		CCNA_02731	0.32	+0.0
2,894,383	-		CCNA_02731	0.33	-0.2
2,894,383	-		CCNA_02731	0.33	-0.6
2,894,430	+		CCNA_02731	0.39	-1.3
2,894,430	+		CCNA_02731	0.39	-1.7
2,894,438	-		CCNA_02731	0.41	+1.6
2,894,467	+		CCNA_02731	0.45	+0.2
2,894,491	-		CCNA_02731	0.48	+1.4
2,894,491	-		CCNA_02731	0.48	+0.8