Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01494

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
1,602,296	-		CCNA_01493	0.18	-0.5
1,602,296	-		CCNA_01493	0.18	-0.9
1,602,297	-		CCNA_01493	0.18	-1.6
1,602,322	-		CCNA_01493	0.21	-0.8
1,602,334	+				+3.1
1,602,382	-		CCNA_01493	0.27	+1.1
1,602,386	+		CCNA_01493	0.27	+0.6
1,602,391	+		CCNA_01493	0.28	-1.7
1,602,404	+		CCNA_01493	0.29	-0.4
1,602,457	-		CCNA_01493	0.34	-0.4
1,602,457	-		CCNA_01493	0.34	+1.2
1,602,525	+		CCNA_01493	0.41	-0.3
1,602,533	-		CCNA_01493	0.42	+0.7
1,602,533	-		CCNA_01493	0.42	+1.2
1,602,541	+		CCNA_01493	0.43	-1.4
1,602,579	-		CCNA_01493	0.46	+0.5
1,602,593	-		CCNA_01493	0.48	-0.7
1,602,676	-		CCNA_01493	0.56	+0.5
1,602,686	+		CCNA_01493	0.57	-1.0
1,602,695	-		CCNA_01493	0.58	+2.5
1,602,743	+		CCNA_01493	0.63	-0.0
1,602,797	-		CCNA_01493	0.68	-0.5
1,602,824	-		CCNA_01493	0.71	-1.9
1,602,839	-		CCNA_01493	0.72	+2.4
1,602,848	+		CCNA_01493	0.73	-0.8
1,602,853	+		CCNA_01493	0.74	-1.6
1,602,869	+		CCNA_01493	0.75	+0.2
1,602,869	+		CCNA_01493	0.75	-0.9
1,602,877	-		CCNA_01493	0.76	-0.6
1,602,882	-		CCNA_01493	0.77	-1.1
1,602,898	-		CCNA_01493	0.78	-1.7
1,602,912	-		CCNA_01493	0.80	+0.3
1,602,938	+		CCNA_01493	0.82	+1.7
1,602,938	+		CCNA_01493	0.82	+0.8
1,602,946	-		CCNA_01493	0.83	-1.4
1,602,946	-		CCNA_01493	0.83	+0.3
1,602,951	-		CCNA_01493	0.84	+2.7
1,602,979	+		CCNA_01493	0.86	-0.7
1,602,979	+		CCNA_01493	0.86	-0.2
1,602,979	+		CCNA_01493	0.86	-0.0
1,602,987	-		CCNA_01493	0.87	+0.5
1,602,987	-		CCNA_01493	0.87	-0.0
1,603,015	-				-1.5
1,603,031	-				-0.3
1,603,071	-				+1.1
1,603,071	-				+0.5
1,603,071	-				-0.0
1,603,094	+				-1.7
1,603,099	+				-1.3
1,603,102	-				-0.6
1,603,102	-				+0.1
1,603,102	-				+0.0
1,603,138	-				+0.5
1,603,138	-				-1.1
1,603,197	+				-2.3
1,603,232	+				+0.3
1,603,233	+				+0.1
1,603,241	-				+1.4
1,603,246	-				+2.5
1,603,299	+				+3.9
1,603,299	+				-2.2
1,603,307	-				+0.8
1,603,307	-				-1.4
1,603,307	-				+2.0
1,603,307	-				+1.0
1,603,321	-				+0.9
1,603,331	-				+2.1
1,603,341	-				+0.1
1,603,341	-				-0.6
1,603,341	-				-0.3
1,603,341	-				-0.5
1,603,363	-				+0.5
1,603,378	-				+1.5
1,603,391	+				-1.3
1,603,399	-				+0.6
1,603,399	-				+0.0
1,603,399	-				-2.9
1,603,434	-		CCNA_01494	0.12	+0.3
1,603,470	-		CCNA_01494	0.14	-0.3
1,603,470	-		CCNA_01494	0.14	-1.6
1,603,537	+		CCNA_01494	0.20	-1.1
1,603,550	-		CCNA_01494	0.21	-2.7
1,603,564	+		CCNA_01494	0.22	-0.7
1,603,572	-		CCNA_01494	0.23	-0.9
1,603,632	+		CCNA_01494	0.28	-1.6
1,603,664	-		CCNA_01494	0.30	-0.8
1,603,681	-		CCNA_01494	0.31	-1.8
1,603,703	-		CCNA_01494	0.33	+0.7
1,603,711	+		CCNA_01494	0.34	-2.6
1,603,719	-		CCNA_01494	0.35	-0.4
1,603,726	+		CCNA_01494	0.35	+0.3
1,603,749	+		CCNA_01494	0.37	-0.3
1,603,757	-		CCNA_01494	0.38	-0.5
1,603,873	-		CCNA_01494	0.47	-2.2
1,603,873	-		CCNA_01494	0.47	-0.7
1,603,962	+		CCNA_01494	0.54	-1.0
1,603,962	+		CCNA_01494	0.54	+0.3
1,603,962	+		CCNA_01494	0.54	-1.2
1,603,970	-		CCNA_01494	0.55	+1.0
1,604,006	+		CCNA_01494	0.58	-0.3
1,604,009	-		CCNA_01494	0.58	-2.0
1,604,009	-		CCNA_01494	0.58	-0.3
1,604,016	+		CCNA_01494	0.58	-1.1
1,604,032	-		CCNA_01494	0.60	-0.7
1,604,032	-		CCNA_01494	0.60	+0.1
1,604,040	-		CCNA_01494	0.60	+0.8
1,604,048	+		CCNA_01494	0.61	-0.3
1,604,245	-		CCNA_01494	0.77	-1.5
1,604,245	-		CCNA_01494	0.77	-0.0
1,604,262	+		CCNA_01494	0.78	-0.5
1,604,331	-		CCNA_01494	0.84	-0.6
1,604,353	+		CCNA_01494	0.86	-0.0
1,604,361	-		CCNA_01494	0.86	+0.1
1,604,361	-		CCNA_01494	0.86	-1.8
1,604,454	-				-0.7
1,604,474	+				-2.8
1,604,474	+				+0.8
1,604,482	-				-0.5
1,604,482	-				+0.7
1,604,482	-				-1.6
1,604,529	-				+2.5
1,604,533	+				-0.8
1,604,533	+				+0.5
1,604,534	+				-0.3
1,604,541	-				+0.0
1,604,574	+				-0.6
1,604,588	-				-1.0
1,604,588	-				+0.3
1,604,638	+				+2.1
1,604,646	-				+0.5
1,604,668	+				-0.3
1,604,729	+		CCNA_01495	0.11	+0.6
1,604,891	-		CCNA_01495	0.22	+1.1
1,604,901	-		CCNA_01495	0.22	+0.1
1,604,901	-		CCNA_01495	0.22	+0.8
1,604,902	-		CCNA_01495	0.23	-1.9
1,604,948	+		CCNA_01495	0.26	-0.2
1,604,963	-		CCNA_01495	0.27	+0.1
1,604,981	+		CCNA_01495	0.28	-1.8
1,605,106	+		CCNA_01495	0.37	-0.7
1,605,106	+		CCNA_01495	0.37	-1.6
1,605,106	+		CCNA_01495	0.37	+1.2
1,605,114	-		CCNA_01495	0.37	-0.2
1,605,129	-		CCNA_01495	0.38	-1.3
1,605,202	-		CCNA_01495	0.43	+1.1
1,605,204	+		CCNA_01495	0.43	-0.8
1,605,207	-		CCNA_01495	0.44	-1.8
1,605,222	+		CCNA_01495	0.45	+3.6
1,605,227	+		CCNA_01495	0.45	-0.1
1,605,235	-		CCNA_01495	0.45	-0.5
1,605,237	+		CCNA_01495	0.46	-0.3
1,605,237	+		CCNA_01495	0.46	-0.9
1,605,237	+		CCNA_01495	0.46	-1.3
1,605,240	-		CCNA_01495	0.46	-0.4
1,605,330	-		CCNA_01495	0.52	-0.6
1,605,347	+		CCNA_01495	0.53	-0.1
1,605,347	+		CCNA_01495	0.53	+0.3
1,605,360	+		CCNA_01495	0.54	-1.1
1,605,390	+		CCNA_01495	0.56	-0.4
1,605,390	+		CCNA_01495	0.56	-1.7
1,605,398	+		CCNA_01495	0.57	+0.7
1,605,399	-		CCNA_01495	0.57	-0.2
1,605,407	-		CCNA_01495	0.57	-1.6
1,605,416	-		CCNA_01495	0.58	-0.5
1,605,429	+		CCNA_01495	0.59	-2.2
1,605,452	-		CCNA_01495	0.60	-2.8
1,605,468	-		CCNA_01495	0.62	-1.2
1,605,511	+		CCNA_01495	0.64	-1.8
1,605,516	+		CCNA_01495	0.65	-1.4