Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22885

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
5,605,500	+		CA265_RS22880	0.73	-0.4
5,605,501	-		CA265_RS22880	0.73	-0.0
5,605,501	-		CA265_RS22880	0.73	+0.4
5,605,551	+		CA265_RS22880	0.74	-0.8
5,605,568	-		CA265_RS22880	0.75	-0.3
5,605,623	+		CA265_RS22880	0.77	-0.3
5,605,626	-		CA265_RS22880	0.77	-0.7
5,605,626	-		CA265_RS22880	0.77	-0.5
5,605,661	+		CA265_RS22880	0.78	-0.9
5,605,665	-		CA265_RS22880	0.78	-0.2
5,605,665	-		CA265_RS22880	0.78	-0.6
5,605,665	-		CA265_RS22880	0.78	+0.0
5,605,743	-		CA265_RS22880	0.81	+0.2
5,605,795	+		CA265_RS22880	0.82	-1.3
5,605,801	+		CA265_RS22880	0.83	+0.3
5,605,801	+				-0.8
5,605,825	+		CA265_RS22880	0.83	+0.8
5,605,843	+		CA265_RS22880	0.84	+0.6
5,605,844	-		CA265_RS22880	0.84	-0.2
5,605,844	-		CA265_RS22880	0.84	-0.0
5,605,869	+		CA265_RS22880	0.85	-0.4
5,605,869	+		CA265_RS22880	0.85	+1.8
5,605,870	-		CA265_RS22880	0.85	-0.4
5,605,870	-		CA265_RS22880	0.85	-0.0
5,605,870	-		CA265_RS22880	0.85	-0.5
5,605,874	-		CA265_RS22880	0.85	-1.5
5,605,936	-		CA265_RS22880	0.87	-0.2
5,606,043	+				+0.8
5,606,100	-				+0.5
5,606,155	+				+0.0
5,606,155	+				-1.2
5,606,190	+				-0.8
5,606,194	+				-0.2
5,606,198	-				-1.4
5,606,235	+				-0.1
5,606,331	+				-0.7
5,606,406	+				+1.0
5,606,406	+				-1.0
5,606,406	+				+0.5
5,606,430	-				-0.8
5,606,490	+		CA265_RS22885	0.11	-0.6
5,606,504	-		CA265_RS22885	0.14	-0.4
5,606,512	-		CA265_RS22885	0.16	-1.4
5,606,581	+		CA265_RS22885	0.32	-0.2
5,606,668	+		CA265_RS22885	0.51	-0.5
5,606,696	-		CA265_RS22885	0.57	-1.3
5,606,728	+		CA265_RS22885	0.65	-1.5
5,606,729	-		CA265_RS22885	0.65	+0.6
5,606,846	-				-0.7
5,606,846	-				+0.1
5,606,883	-				-0.5
5,606,940	-				+0.9
5,606,942	-				-1.2
5,606,984	-				+0.3
5,607,021	-				-2.2
5,607,047	+				+0.2
5,607,047	+				-0.1
5,607,047	+				-0.2
5,607,048	-				-0.2
5,607,048	-				+0.4
5,607,051	+				-2.4
5,607,051	+				+0.6
5,607,051	+				-0.2
5,607,051	+				-1.4
5,607,052	-				+0.2
5,607,052	-				-2.1
5,607,070	-				+0.1
5,607,132	+				-0.1
5,607,206	+				+0.4
5,607,213	+				-0.8
5,607,303	-				-1.7
5,607,441	-		CA265_RS22890	0.15	-0.0
5,607,588	+		CA265_RS22890	0.25	-0.5
5,607,605	-		CA265_RS22890	0.26	-0.5
5,607,676	+		CA265_RS22890	0.31	+0.7
5,607,794	+		CA265_RS22890	0.40	-1.4
5,607,795	-		CA265_RS22890	0.40	+0.0
5,607,878	-		CA265_RS22890	0.46	-1.7
5,607,878	-		CA265_RS22890	0.46	-0.2
5,607,878	-		CA265_RS22890	0.46	+1.0