Experiment: R2A with Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS14890 and CA265_RS14895 are separated by 548 nucleotides CA265_RS14895 and CA265_RS14900 are separated by 515 nucleotides
CA265_RS14890: CA265_RS14890 - Clp protease ClpC, at 3,752,438 to 3,754,990
_RS14890
CA265_RS14895: CA265_RS14895 - hypothetical protein, at 3,755,539 to 3,756,036
_RS14895
CA265_RS14900: CA265_RS14900 - hypothetical protein, at 3,756,552 to 3,759,476
_RS14900
Position (kb)
3755
3756
3757 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3754.994 kb on - strand at 3755.010 kb on - strand at 3755.176 kb on + strand at 3755.190 kb on + strand at 3755.192 kb on + strand at 3755.258 kb on - strand at 3755.300 kb on + strand at 3755.404 kb on + strand at 3755.404 kb on + strand at 3755.405 kb on - strand at 3755.418 kb on + strand at 3755.432 kb on + strand at 3755.481 kb on + strand at 3755.487 kb on - strand at 3755.546 kb on + strand at 3755.712 kb on + strand, within CA265_RS14895 at 3755.745 kb on + strand, within CA265_RS14895 at 3755.789 kb on - strand, within CA265_RS14895 at 3755.850 kb on + strand, within CA265_RS14895 at 3755.850 kb on + strand, within CA265_RS14895 at 3755.856 kb on + strand, within CA265_RS14895 at 3755.885 kb on + strand, within CA265_RS14895 at 3755.885 kb on + strand, within CA265_RS14895 at 3755.886 kb on - strand, within CA265_RS14895 at 3755.887 kb on + strand, within CA265_RS14895 at 3755.887 kb on + strand, within CA265_RS14895 at 3755.890 kb on + strand, within CA265_RS14895 at 3755.964 kb on + strand, within CA265_RS14895 at 3756.014 kb on - strand at 3756.081 kb on + strand at 3756.081 kb on + strand at 3756.084 kb on + strand at 3756.092 kb on + strand at 3756.092 kb on + strand at 3756.206 kb on + strand at 3756.207 kb on - strand at 3756.291 kb on - strand at 3756.299 kb on + strand at 3756.339 kb on - strand at 3756.342 kb on + strand at 3756.417 kb on - strand at 3756.425 kb on - strand at 3756.425 kb on - strand at 3756.433 kb on - strand at 3756.435 kb on + strand at 3756.454 kb on - strand at 3756.458 kb on + strand at 3756.528 kb on + strand at 3756.529 kb on - strand at 3756.539 kb on + strand at 3756.590 kb on + strand at 3756.723 kb on + strand at 3756.723 kb on + strand at 3756.723 kb on + strand at 3756.726 kb on - strand at 3756.807 kb on - strand at 3756.815 kb on - strand at 3756.826 kb on + strand at 3756.870 kb on + strand, within CA265_RS14900 at 3756.871 kb on - strand, within CA265_RS14900 at 3756.940 kb on + strand, within CA265_RS14900
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cisplatin 0.01 mg/ml remove 3,754,994 - -0.4 3,755,010 - -0.5 3,755,176 + -0.0 3,755,190 + -1.0 3,755,192 + -0.9 3,755,258 - +1.4 3,755,300 + -0.7 3,755,404 + +1.3 3,755,404 + -0.7 3,755,405 - +0.7 3,755,418 + -0.4 3,755,432 + -0.4 3,755,481 + -0.6 3,755,487 - -0.9 3,755,546 + +0.6 3,755,712 + CA265_RS14895 0.35 -1.1 3,755,745 + CA265_RS14895 0.41 -1.1 3,755,789 - CA265_RS14895 0.50 +0.6 3,755,850 + CA265_RS14895 0.62 -3.6 3,755,850 + CA265_RS14895 0.62 -0.4 3,755,856 + CA265_RS14895 0.64 -0.2 3,755,885 + CA265_RS14895 0.69 -2.1 3,755,885 + CA265_RS14895 0.69 -0.4 3,755,886 - CA265_RS14895 0.70 -1.9 3,755,887 + CA265_RS14895 0.70 +0.6 3,755,887 + CA265_RS14895 0.70 -1.4 3,755,890 + CA265_RS14895 0.70 -0.6 3,755,964 + CA265_RS14895 0.85 -0.6 3,756,014 - -1.4 3,756,081 + +0.2 3,756,081 + +0.1 3,756,084 + -0.4 3,756,092 + +0.8 3,756,092 + -0.4 3,756,206 + -1.9 3,756,207 - +0.2 3,756,291 - -0.5 3,756,299 + -0.0 3,756,339 - -0.4 3,756,342 + -0.9 3,756,417 - +0.3 3,756,425 - +0.3 3,756,425 - +0.9 3,756,433 - +0.1 3,756,435 + -0.2 3,756,454 - -0.5 3,756,458 + -0.4 3,756,528 + -0.1 3,756,529 - +0.7 3,756,539 + +0.0 3,756,590 + -0.5 3,756,723 + -1.5 3,756,723 + -0.8 3,756,723 + -0.8 3,756,726 - +0.1 3,756,807 - -0.4 3,756,815 - -0.0 3,756,826 + +0.2 3,756,870 + CA265_RS14900 0.11 +1.1 3,756,871 - CA265_RS14900 0.11 +0.5 3,756,940 + CA265_RS14900 0.13 -0.0
Or see this region's nucleotide sequence