Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12990

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
3,232,893	-				+1.5
3,232,911	+				-0.2
3,232,919	-				+0.3
3,232,919	-				+1.0
3,232,928	+				+1.5
3,232,983	+				+0.6
3,233,091	+		CA265_RS12985	0.17	+0.2
3,233,092	-		CA265_RS12985	0.17	-0.8
3,233,124	+		CA265_RS12985	0.25	-0.2
3,233,125	-		CA265_RS12985	0.25	-0.4
3,233,270	+		CA265_RS12985	0.60	+0.3
3,233,483	-				+1.7
3,233,575	-				-1.0
3,233,577	+				-0.7
3,233,577	+				-1.0
3,233,599	-				-0.7
3,233,649	+				-1.9
3,233,685	-				-2.0
3,233,820	+				-1.6
3,233,871	+				-0.7
3,233,872	-				-1.1
3,233,880	+				-1.5
3,233,973	+		CA265_RS12990	0.11	-1.0
3,234,044	+		CA265_RS12990	0.14	-0.8
3,234,081	-		CA265_RS12990	0.15	-0.0
3,234,196	-		CA265_RS12990	0.18	-1.3
3,234,211	+		CA265_RS12990	0.18	-0.9
3,234,229	+		CA265_RS12990	0.19	-0.0
3,234,273	-		CA265_RS12990	0.20	-0.0
3,234,288	-		CA265_RS12990	0.20	-0.8
3,234,393	+		CA265_RS12990	0.23	+0.1
3,234,393	+		CA265_RS12990	0.23	-2.5
3,234,571	-		CA265_RS12990	0.28	-1.2
3,234,574	+		CA265_RS12990	0.28	-1.0
3,234,591	-		CA265_RS12990	0.29	-0.7
3,234,749	+		CA265_RS12990	0.33	-1.8
3,234,749	+		CA265_RS12990	0.33	-2.5
3,234,750	-		CA265_RS12990	0.33	-3.1
3,234,750	-		CA265_RS12990	0.33	+0.6
3,234,750	-		CA265_RS12990	0.33	-0.8
3,234,750	-		CA265_RS12990	0.33	-0.7
3,234,848	+		CA265_RS12990	0.36	-1.6
3,234,888	+		CA265_RS12990	0.37	-1.4
3,234,918	+		CA265_RS12990	0.38	-0.8
3,234,981	-		CA265_RS12990	0.40	+0.4
3,234,981	-		CA265_RS12990	0.40	-0.4
3,235,042	+		CA265_RS12990	0.42	+0.5
3,235,044	+		CA265_RS12990	0.42	-1.1
3,235,045	-		CA265_RS12990	0.42	-0.1
3,235,185	-		CA265_RS12990	0.46	+0.1
3,235,329	+		CA265_RS12990	0.50	-1.0
3,235,370	+		CA265_RS12990	0.51	-1.6
3,235,371	-		CA265_RS12990	0.51	-1.0
3,235,371	-		CA265_RS12990	0.51	+0.1
3,235,504	+		CA265_RS12990	0.55	-0.8
3,235,505	-		CA265_RS12990	0.55	-0.8
3,235,626	+		CA265_RS12990	0.58	+0.4
3,235,635	+		CA265_RS12990	0.58	-0.7
3,235,647	-		CA265_RS12990	0.59	-0.7
3,235,667	+		CA265_RS12990	0.59	-2.0
3,235,667	+		CA265_RS12990	0.59	+0.4
3,235,929	+		CA265_RS12990	0.67	-0.5
3,235,929	+		CA265_RS12990	0.67	-1.1
3,235,976	-		CA265_RS12990	0.68	-0.8
3,235,976	-		CA265_RS12990	0.68	-1.3
3,235,976	-		CA265_RS12990	0.68	-0.2
3,236,039	+		CA265_RS12990	0.70	-1.2
3,236,135	+		CA265_RS12990	0.73	-1.3
3,236,135	+		CA265_RS12990	0.73	-3.5
3,236,135	+		CA265_RS12990	0.73	+0.1
3,236,136	-		CA265_RS12990	0.73	-2.1
3,236,176	+		CA265_RS12990	0.74	-0.4
3,236,227	+		CA265_RS12990	0.75	-1.5
3,236,250	+		CA265_RS12990	0.76	-2.0
3,236,251	-		CA265_RS12990	0.76	-2.0
3,236,309	+		CA265_RS12990	0.77	+0.2
3,236,375	+		CA265_RS12990	0.79	-0.6
3,236,508	+		CA265_RS12990	0.83	+0.2
3,236,533	-		CA265_RS12990	0.84	-1.0
3,236,552	-		CA265_RS12990	0.84	-1.2
3,236,584	-		CA265_RS12990	0.85	-1.4
3,236,617	-		CA265_RS12990	0.86	-0.8
3,236,702	+		CA265_RS12990	0.89	+0.1
3,236,703	-		CA265_RS12990	0.89	-0.3
3,236,719	-		CA265_RS12990	0.89	-0.1
3,236,766	+				-0.8
3,236,775	+				+0.5
3,236,778	-				-0.8
3,236,869	+				-1.6
3,236,955	+				-1.5
3,237,001	-				-0.4
3,237,030	+				-0.8
3,237,030	+				-0.5
3,237,074	+				-2.6
3,237,095	+				-0.4
3,237,104	-				+0.2
3,237,239	+				-1.1
3,237,266	-				-1.0
3,237,270	+				-1.0
3,237,272	+				+0.5
3,237,272	+				+0.5
3,237,393	+				+0.4
3,237,402	+				-0.3
3,237,516	-		CA265_RS12995	0.58	-0.1
3,237,602	-				-0.9
3,237,602	-				-0.7
3,237,602	-				-0.0
3,237,602	-				-0.3
3,237,602	-				+0.3
3,237,611	+				+0.3
3,237,612	-				+0.9
3,237,612	-				+0.3
3,237,690	-		CA265_RS13000	0.21	+0.6
3,237,731	+		CA265_RS13000	0.31	+0.0
3,237,788	-		CA265_RS13000	0.45	+0.2
3,237,839	-		CA265_RS13000	0.57	-0.1
3,237,867	+		CA265_RS13000	0.64	-0.6
3,237,946	+		CA265_RS13000	0.83	-0.1
3,237,948	-		CA265_RS13000	0.84	-1.2
3,237,948	-		CA265_RS13000	0.84	+1.0
3,237,952	+		CA265_RS13000	0.85	+0.0
3,238,017	-				-0.3
3,238,038	+				+0.3