Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11965

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
2,964,100	+		CA265_RS11960	0.38	+1.2
2,964,100	+		CA265_RS11960	0.38	-0.9
2,964,100	+		CA265_RS11960	0.38	-0.1
2,964,248	+		CA265_RS11960	0.48	+0.6
2,964,318	+		CA265_RS11960	0.52	-0.9
2,964,336	+		CA265_RS11960	0.54	-0.1
2,964,336	+		CA265_RS11960	0.54	-0.3
2,964,413	-		CA265_RS11960	0.59	-0.3
2,964,418	+		CA265_RS11960	0.59	+0.4
2,964,419	-		CA265_RS11960	0.59	+0.4
2,964,523	+		CA265_RS11960	0.66	-0.4
2,964,733	+		CA265_RS11960	0.80	+0.1
2,964,733	+		CA265_RS11960	0.80	-0.8
2,964,829	-		CA265_RS11960	0.87	+0.0
2,964,836	+		CA265_RS11960	0.87	+0.3
2,964,837	-		CA265_RS11960	0.87	+0.2
2,964,929	+				-1.4
2,964,929	+				+0.1
2,964,930	-				-0.6
2,964,930	-				+0.6
2,964,937	-				-0.4
2,964,983	+				+0.5
2,964,984	-				-0.5
2,965,012	-				+0.0
2,965,012	-				-0.1
2,965,012	-				+0.8
2,965,028	+				+0.3
2,965,037	+				+0.1
2,965,038	-				+0.4
2,965,051	+				+1.0
2,965,069	-				-2.0
2,965,220	+				+0.3
2,965,221	-				-0.0
2,965,363	+				+0.4
2,965,404	+		CA265_RS11965	0.11	-0.3
2,965,405	-		CA265_RS11965	0.11	+0.2
2,965,460	-		CA265_RS11965	0.13	+0.1
2,965,525	+		CA265_RS11965	0.15	-0.6
2,965,526	-		CA265_RS11965	0.15	+0.2
2,965,662	-		CA265_RS11965	0.19	-0.5
2,965,838	-		CA265_RS11965	0.25	-0.2
2,965,838	-		CA265_RS11965	0.25	-0.3
2,965,932	-		CA265_RS11965	0.27	-3.0
2,965,990	+		CA265_RS11965	0.29	-0.9
2,965,991	-		CA265_RS11965	0.29	+1.7
2,966,100	-		CA265_RS11965	0.33	-0.9
2,966,106	+		CA265_RS11965	0.33	-0.9
2,966,219	+		CA265_RS11965	0.36	-0.3
2,966,229	+		CA265_RS11965	0.37	-0.5
2,966,229	+		CA265_RS11965	0.37	-1.4
2,966,229	+		CA265_RS11965	0.37	-0.6
2,966,229	+		CA265_RS11965	0.37	-0.9
2,966,229	+		CA265_RS11965	0.37	+0.3
2,966,229	+		CA265_RS11965	0.37	-1.0
2,966,230	-		CA265_RS11965	0.37	-0.4
2,966,230	-		CA265_RS11965	0.37	-0.1
2,966,336	+		CA265_RS11965	0.40	-0.6
2,966,336	+		CA265_RS11965	0.40	+0.1
2,966,340	+		CA265_RS11965	0.40	+0.0
2,966,340	+		CA265_RS11965	0.40	+0.6
2,966,341	-		CA265_RS11965	0.40	-0.7
2,966,366	+		CA265_RS11965	0.41	-0.2
2,966,367	-		CA265_RS11965	0.41	+1.3
2,966,377	-		CA265_RS11965	0.41	-0.8
2,966,583	+		CA265_RS11965	0.48	-0.1
2,966,606	+		CA265_RS11965	0.48	+0.1
2,966,637	-		CA265_RS11965	0.49	-0.2
2,966,708	+		CA265_RS11965	0.51	-0.9
2,966,925	+		CA265_RS11965	0.58	-0.4
2,966,947	+		CA265_RS11965	0.59	-0.1
2,967,253	+		CA265_RS11965	0.68	-0.8
2,967,290	+		CA265_RS11965	0.69	-1.0
2,967,387	+		CA265_RS11965	0.72	-0.0
2,967,388	-		CA265_RS11965	0.73	-0.2
2,967,396	+		CA265_RS11965	0.73	-0.4
2,967,397	-		CA265_RS11965	0.73	-0.2
2,967,400	+		CA265_RS11965	0.73	-0.3
2,967,442	+		CA265_RS11965	0.74	+0.4
2,967,647	+		CA265_RS11965	0.81	+0.8
2,967,647	+		CA265_RS11965	0.81	+1.6
2,967,725	+		CA265_RS11965	0.83	+0.1
2,967,755	+		CA265_RS11965	0.84	-0.3
2,967,756	-		CA265_RS11965	0.84	+0.9
2,967,764	-		CA265_RS11965	0.84	-0.9
2,967,764	-		CA265_RS11965	0.84	+1.3
2,967,888	-		CA265_RS11965	0.88	+0.4
2,967,935	+		CA265_RS11965	0.89	+0.8
2,967,936	-		CA265_RS11965	0.89	-1.9
2,967,950	+		CA265_RS11965	0.90	+0.2
2,967,951	-				+0.8
2,967,951	-		CA265_RS11965	0.90	+0.4
2,967,951	-		CA265_RS11965	0.90	+1.2
2,967,951	-				-0.2
2,968,034	+				+0.1
2,968,248	+				+1.9
2,968,285	-				-2.0
2,968,348	-				+0.9
2,968,412	+				-0.2
2,968,413	-				-0.4
2,968,459	-		CA265_RS11970	0.17	-1.2
2,968,682	+		CA265_RS11970	0.52	+0.7
2,968,683	-		CA265_RS11970	0.52	-0.3
2,968,891	+		CA265_RS11970	0.86	-0.4
2,968,891	+		CA265_RS11970	0.86	-0.1
2,968,892	-		CA265_RS11970	0.86	+0.1
2,968,892	-		CA265_RS11970	0.86	-0.0
2,968,925	+				+0.8
2,968,925	+				-1.8
2,968,926	-				+0.9
2,969,042	-				+1.4
2,969,042	-				+0.1
2,969,074	+				+1.5
2,969,190	+				-1.2
2,969,219	+				+0.4
2,969,219	+				+0.2