Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09100

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
2,267,295	-		CA265_RS09095	0.38	-2.2
2,267,326	-		CA265_RS09095	0.40	-0.6
2,267,419	+		CA265_RS09095	0.46	-0.6
2,267,430	-		CA265_RS09095	0.46	-0.2
2,267,444	+		CA265_RS09095	0.47	-0.5
2,267,551	+		CA265_RS09095	0.54	-1.1
2,267,555	+		CA265_RS09095	0.54	-0.8
2,267,556	-		CA265_RS09095	0.54	-1.6
2,267,556	-		CA265_RS09095	0.54	-1.0
2,267,556	-		CA265_RS09095	0.54	-0.9
2,267,573	+		CA265_RS09095	0.55	-0.1
2,267,573	+		CA265_RS09095	0.55	-0.9
2,267,662	-		CA265_RS09095	0.61	+0.0
2,267,662	-		CA265_RS09095	0.61	-1.1
2,267,702	+		CA265_RS09095	0.63	-0.6
2,267,711	-		CA265_RS09095	0.64	-2.2
2,267,735	-		CA265_RS09095	0.65	-0.6
2,267,767	+		CA265_RS09095	0.67	-1.4
2,267,768	-		CA265_RS09095	0.68	-0.2
2,267,768	-		CA265_RS09095	0.68	-0.2
2,267,768	-		CA265_RS09095	0.68	-1.1
2,267,774	-		CA265_RS09095	0.68	-0.3
2,267,790	-		CA265_RS09095	0.69	+0.4
2,267,870	-		CA265_RS09095	0.74	-0.9
2,267,977	+		CA265_RS09095	0.81	-1.8
2,267,977	+		CA265_RS09095	0.81	-0.7
2,268,058	-		CA265_RS09095	0.86	+0.2
2,268,098	+		CA265_RS09095	0.88	+0.1
2,268,099	-		CA265_RS09095	0.88	-1.1
2,268,179	-				-0.3
2,268,204	+				-0.5
2,268,205	-				-1.2
2,268,205	-				-0.5
2,268,288	-				+1.4
2,268,291	+				-0.8
2,268,412	-		CA265_RS09100	0.12	-1.4
2,268,412	-		CA265_RS09100	0.12	-1.2
2,268,424	-		CA265_RS09100	0.13	-0.2
2,268,429	-		CA265_RS09100	0.14	-3.4
2,268,625	+		CA265_RS09100	0.33	-0.2
2,268,626	-		CA265_RS09100	0.33	-1.1
2,268,626	-		CA265_RS09100	0.33	-0.5
2,268,626	-		CA265_RS09100	0.33	-2.1
2,268,682	-		CA265_RS09100	0.38	-3.7
2,268,692	-		CA265_RS09100	0.39	+0.3
2,268,706	-		CA265_RS09100	0.41	-2.5
2,268,743	+		CA265_RS09100	0.44	-0.2
2,268,744	-		CA265_RS09100	0.45	+0.2
2,268,744	-		CA265_RS09100	0.45	-0.4
2,268,744	-		CA265_RS09100	0.45	-1.1
2,268,744	-		CA265_RS09100	0.45	-0.4
2,268,748	-		CA265_RS09100	0.45	-0.6
2,268,776	-				+1.1
2,268,798	+		CA265_RS09100	0.50	-0.1
2,268,799	-		CA265_RS09100	0.50	-1.4
2,268,809	-		CA265_RS09100	0.51	-2.2
2,268,812	-		CA265_RS09100	0.51	-0.6
2,268,812	-		CA265_RS09100	0.51	-0.4
2,268,831	+		CA265_RS09100	0.53	-1.9
2,268,832	-		CA265_RS09100	0.53	-0.2
2,268,940	+		CA265_RS09100	0.64	-4.8
2,268,982	-		CA265_RS09100	0.68	-1.1
2,269,015	-		CA265_RS09100	0.71	-0.3
2,269,016	+		CA265_RS09100	0.71	-4.1
2,269,168	-		CA265_RS09100	0.86	-0.9
2,269,186	-		CA265_RS09100	0.87	-0.4
2,269,258	-				+0.4
2,269,315	-				+2.2
2,270,094	+				-0.1
2,270,105	-				-0.4
2,270,195	+		CA265_RS09110	0.16	+0.5
2,270,196	-		CA265_RS09110	0.16	-0.3
2,270,217	+		CA265_RS09110	0.19	+0.1