Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06550

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
1,617,003	-		CA265_RS06545	0.30	-1.2
1,617,174	-		CA265_RS06545	0.43	-1.4
1,617,180	-		CA265_RS06545	0.43	-1.6
1,617,377	+		CA265_RS06545	0.58	-1.2
1,617,469	+		CA265_RS06545	0.65	-0.6
1,617,470	-		CA265_RS06545	0.65	-2.1
1,617,470	-		CA265_RS06545	0.65	-1.2
1,617,476	-		CA265_RS06545	0.66	-0.5
1,617,481	-		CA265_RS06545	0.66	-1.0
1,617,482	+		CA265_RS06545	0.66	-0.8
1,617,523	-		CA265_RS06545	0.69	-1.7
1,617,551	+		CA265_RS06545	0.71	-1.9
1,617,577	+		CA265_RS06545	0.73	-0.2
1,617,578	-		CA265_RS06545	0.73	-0.5
1,617,657	+		CA265_RS06545	0.79	-1.5
1,617,658	-		CA265_RS06545	0.79	-1.1
1,617,659	+		CA265_RS06545	0.79	-0.8
1,617,678	+		CA265_RS06545	0.81	-0.9
1,617,680	+		CA265_RS06545	0.81	-0.5
1,617,680	+		CA265_RS06545	0.81	-1.6
1,617,707	-		CA265_RS06545	0.83	-1.7
1,617,746	+		CA265_RS06545	0.86	-0.9
1,617,921	+				-0.2
1,617,940	-				-1.6
1,617,956	+				-1.1
1,617,973	+				-1.2
1,618,032	+				-1.4
1,618,048	+				-0.6
1,618,065	+				-0.2
1,618,088	-				-0.3
1,618,123	+				-2.6
1,618,183	+				-1.5
1,618,184	-				-0.5
1,618,193	+				+0.8
1,618,193	+				-1.2
1,618,193	+				-0.8
1,618,194	-				-0.4
1,618,307	+		CA265_RS06550	0.12	-1.2
1,618,308	-		CA265_RS06550	0.12	-1.7
1,618,309	+		CA265_RS06550	0.13	-0.4
1,618,344	+		CA265_RS06550	0.14	-2.5
1,618,344	+		CA265_RS06550	0.14	-0.6
1,618,347	+		CA265_RS06550	0.14	-0.5
1,618,348	-		CA265_RS06550	0.14	-2.5
1,618,355	-		CA265_RS06550	0.14	-1.6
1,618,455	+		CA265_RS06550	0.17	-0.1
1,618,462	+		CA265_RS06550	0.18	-0.4
1,618,488	-		CA265_RS06550	0.18	-3.4
1,618,518	+		CA265_RS06550	0.19	-0.4
1,618,519	-		CA265_RS06550	0.19	-2.1
1,618,522	+		CA265_RS06550	0.20	-1.3
1,618,523	-		CA265_RS06550	0.20	-1.8
1,618,523	-		CA265_RS06550	0.20	-0.6
1,618,703	+		CA265_RS06550	0.26	-1.7
1,618,726	+		CA265_RS06550	0.26	-1.4
1,618,786	+		CA265_RS06550	0.28	-2.4
1,618,834	+		CA265_RS06550	0.30	+0.6
1,618,865	+		CA265_RS06550	0.31	-1.0
1,618,866	-		CA265_RS06550	0.31	+0.4
1,618,866	-		CA265_RS06550	0.31	-0.3
1,618,870	+		CA265_RS06550	0.31	-1.4
1,618,871	-		CA265_RS06550	0.31	+1.4
1,618,871	-		CA265_RS06550	0.31	+0.7
1,618,875	+		CA265_RS06550	0.31	+0.4
1,618,880	+		CA265_RS06550	0.31	+1.0
1,618,904	+		CA265_RS06550	0.32	-1.4
1,618,942	-		CA265_RS06550	0.33	-1.3
1,618,968	+		CA265_RS06550	0.34	-0.6
1,618,991	+		CA265_RS06550	0.35	-2.0
1,619,073	+		CA265_RS06550	0.38	-1.1
1,619,134	+		CA265_RS06550	0.40	-0.2
1,619,199	+		CA265_RS06550	0.42	-1.3
1,619,239	-		CA265_RS06550	0.43	+0.0
1,619,273	+		CA265_RS06550	0.44	-0.7
1,619,273	+		CA265_RS06550	0.44	-0.6
1,619,282	-		CA265_RS06550	0.45	-1.4
1,619,355	-		CA265_RS06550	0.47	-1.3
1,619,356	+		CA265_RS06550	0.47	-1.0
1,619,356	+		CA265_RS06550	0.47	-0.3
1,619,357	-		CA265_RS06550	0.47	-0.2
1,619,404	+		CA265_RS06550	0.49	-3.5
1,619,409	-		CA265_RS06550	0.49	-0.2
1,619,409	-		CA265_RS06550	0.49	-2.3
1,619,484	+		CA265_RS06550	0.51	-0.4
1,619,516	-		CA265_RS06550	0.53	+0.4
1,619,600	+		CA265_RS06550	0.55	-2.0
1,619,600	+		CA265_RS06550	0.55	-1.6
1,619,603	-		CA265_RS06550	0.55	-0.8
1,619,680	+		CA265_RS06550	0.58	-0.9
1,619,681	-		CA265_RS06550	0.58	-1.9
1,619,735	+		CA265_RS06550	0.60	-1.6
1,619,760	-		CA265_RS06550	0.61	-1.3
1,619,844	-		CA265_RS06550	0.63	-0.4
1,619,939	-		CA265_RS06550	0.67	-1.3
1,619,939	-		CA265_RS06550	0.67	-2.9
1,620,007	-		CA265_RS06550	0.69	-2.3
1,620,007	-		CA265_RS06550	0.69	-0.4
1,620,081	-		CA265_RS06550	0.71	-0.6
1,620,128	-		CA265_RS06550	0.73	-0.8
1,620,132	-		CA265_RS06550	0.73	-1.0
1,620,132	-		CA265_RS06550	0.73	-1.8
1,620,143	+		CA265_RS06550	0.73	-2.5
1,620,226	-		CA265_RS06550	0.76	-1.6
1,620,262	+		CA265_RS06550	0.77	-0.5
1,620,333	-		CA265_RS06550	0.80	-1.1
1,620,354	+		CA265_RS06550	0.80	-3.2
1,620,368	-		CA265_RS06550	0.81	-1.0
1,620,368	-				+1.4
1,620,389	+		CA265_RS06550	0.81	-0.2
1,620,453	+		CA265_RS06550	0.84	-1.1
1,620,515	+		CA265_RS06550	0.86	+0.1
1,620,569	-		CA265_RS06550	0.87	-2.1
1,620,602	+		CA265_RS06550	0.89	+0.3
1,620,607	+		CA265_RS06550	0.89	-0.7
1,620,658	+				-0.5
1,620,702	-				-3.8
1,620,730	+				-0.7
1,620,818	+				-1.5
1,620,818	+				-0.8
1,620,889	-				+0.5
1,620,985	+				-0.6
1,621,044	+		CA265_RS06555	0.15	+0.7
1,621,044	+		CA265_RS06555	0.15	+0.0
1,621,069	+		CA265_RS06555	0.19	-0.3
1,621,071	+		CA265_RS06555	0.20	-0.1
1,621,105	-		CA265_RS06555	0.26	-0.5
1,621,205	+		CA265_RS06555	0.43	-0.2
1,621,265	-		CA265_RS06555	0.53	-1.5
1,621,265	-		CA265_RS06555	0.53	+0.9
1,621,269	-		CA265_RS06555	0.54	-0.5
1,621,303	-		CA265_RS06555	0.60	-0.0
1,621,339	-		CA265_RS06555	0.66	+1.4
1,621,339	-		CA265_RS06555	0.66	+0.3
1,621,340	+		CA265_RS06555	0.66	+0.2
1,621,340	+		CA265_RS06555	0.66	-2.1
1,621,341	-		CA265_RS06555	0.66	-0.4
1,621,409	+		CA265_RS06555	0.78	+0.1
1,621,477	-				+1.0
1,621,725	+				+0.1
1,621,750	-				+0.1
1,621,751	+				-0.0
1,621,762	+				-0.2
1,621,875	-		CA265_RS06560	0.13	-0.2