Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06270

Experiment: R2A with Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.01 mg/ml
1,539,847	+		CA265_RS06260	0.42	-1.3
1,539,848	-				+0.4
1,539,901	-		CA265_RS06260	0.50	+0.4
1,539,907	+		CA265_RS06260	0.51	+0.4
1,539,908	-		CA265_RS06260	0.51	-0.5
1,539,984	+		CA265_RS06260	0.63	+0.0
1,539,991	+		CA265_RS06260	0.64	-0.7
1,540,030	-		CA265_RS06260	0.71	+0.6
1,540,030	-		CA265_RS06260	0.71	+0.9
1,540,067	+		CA265_RS06260	0.76	+0.6
1,540,070	-		CA265_RS06260	0.77	-0.5
1,540,110	+		CA265_RS06260	0.83	+0.5
1,540,120	-		CA265_RS06260	0.85	+1.4
1,540,130	-		CA265_RS06260	0.86	-0.1
1,540,130	-		CA265_RS06260	0.86	-0.7
1,540,174	-				-0.4
1,540,189	-				+0.0
1,540,215	-				-0.3
1,540,425	+				+1.4
1,540,502	+		CA265_RS06265	0.38	-1.8
1,540,515	+		CA265_RS06265	0.45	-1.1
1,540,574	+		CA265_RS06265	0.75	-0.1
1,540,629	-				-0.1
1,540,629	-				+0.7
1,540,686	+				+0.4
1,540,730	+				-1.2
1,540,761	-				-0.5
1,540,761	-				-2.2
1,540,795	+				+1.4
1,540,796	-				+0.4
1,540,798	+				+0.0
1,540,888	+				+0.3
1,540,936	-		CA265_RS06270	0.12	+0.1
1,541,062	-		CA265_RS06270	0.23	+0.2
1,541,062	-		CA265_RS06270	0.23	-1.9
1,541,195	+		CA265_RS06270	0.34	+0.3
1,541,230	-		CA265_RS06270	0.37	-1.4
1,541,263	+		CA265_RS06270	0.40	+0.8
1,541,274	+		CA265_RS06270	0.41	-0.5
1,541,284	-		CA265_RS06270	0.41	+0.7
1,541,308	-		CA265_RS06270	0.44	+0.8
1,541,331	+		CA265_RS06270	0.45	+0.6
1,541,371	-		CA265_RS06270	0.49	+0.4
1,541,445	-		CA265_RS06270	0.55	-0.2
1,541,455	-		CA265_RS06270	0.56	-0.6
1,541,497	-		CA265_RS06270	0.59	+1.3
1,541,500	+		CA265_RS06270	0.60	+0.1
1,541,501	-		CA265_RS06270	0.60	-1.7
1,541,519	+		CA265_RS06270	0.61	+0.4
1,541,519	+		CA265_RS06270	0.61	-0.6
1,541,520	-		CA265_RS06270	0.61	-1.1
1,541,581	-		CA265_RS06270	0.66	-0.4
1,541,581	-		CA265_RS06270	0.66	-0.2
1,541,669	-		CA265_RS06270	0.74	+1.2
1,541,696	+		CA265_RS06270	0.76	-0.8
1,541,697	-		CA265_RS06270	0.76	-0.1
1,541,697	-		CA265_RS06270	0.76	+0.2
1,541,701	-		CA265_RS06270	0.77	+0.1
1,541,701	-		CA265_RS06270	0.77	+0.1
1,541,726	+		CA265_RS06270	0.79	+0.4
1,541,756	+		CA265_RS06270	0.81	+0.0
1,541,776	-		CA265_RS06270	0.83	-0.7
1,541,786	-		CA265_RS06270	0.84	+1.0
1,541,793	-		CA265_RS06270	0.84	+1.1
1,541,793	-		CA265_RS06270	0.84	-0.2
1,541,940	-				+0.5
1,541,942	-				+1.1
1,541,958	-				-0.6
1,541,992	-				-0.1
1,542,047	+				-0.9
1,542,051	+				-1.6
1,542,052	-				-3.5
1,542,164	-				-1.2
1,542,164	-				-0.7
1,542,167	-				-0.1
1,542,167	-				+0.7
1,542,171	+				+1.1
1,542,178	-				-0.8
1,542,246	+		CA265_RS06275	0.11	-1.2
1,542,249	-		CA265_RS06275	0.11	-1.0
1,542,414	+		CA265_RS06275	0.24	+1.1
1,542,504	+		CA265_RS06275	0.31	+0.3
1,542,545	-		CA265_RS06275	0.34	+0.1
1,542,564	+		CA265_RS06275	0.36	-0.4
1,542,595	+		CA265_RS06275	0.38	+0.7
1,542,614	+		CA265_RS06275	0.40	-0.0
1,542,614	+		CA265_RS06275	0.40	+0.7
1,542,615	-		CA265_RS06275	0.40	-0.5
1,542,615	-		CA265_RS06275	0.40	+0.3
1,542,691	+		CA265_RS06275	0.46	+0.2
1,542,691	+		CA265_RS06275	0.46	-0.6
1,542,721	+		CA265_RS06275	0.48	+0.1
1,542,765	-		CA265_RS06275	0.52	+0.0
1,542,785	-		CA265_RS06275	0.53	+0.2
1,542,837	+		CA265_RS06275	0.57	+0.3
1,542,863	-		CA265_RS06275	0.59	+0.5
1,542,874	+		CA265_RS06275	0.60	+0.3