Experiment: R2A with Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02355 and CA265_RS02360 are separated by 59 nucleotides CA265_RS02360 and CA265_RS02365 are separated by 140 nucleotides CA265_RS02365 and CA265_RS02370 are separated by 0 nucleotides
CA265_RS02355: CA265_RS02355 - hypothetical protein, at 587,841 to 588,251
_RS02355
CA265_RS02360: CA265_RS02360 - DNA polymerase III subunit gamma/tau, at 588,311 to 590,134
_RS02360
CA265_RS02365: CA265_RS02365 - hypothetical protein, at 590,275 to 591,039
_RS02365
CA265_RS02370: CA265_RS02370 - AraC family transcriptional regulator, at 591,040 to 591,903
_RS02370
Position (kb) 588
589
590
591 Strain fitness (log2 ratio) -2
-1
0
1 at 587.330 kb on + strand at 587.408 kb on + strand at 587.490 kb on + strand at 587.496 kb on + strand at 587.510 kb on + strand at 587.538 kb on - strand at 587.561 kb on - strand at 587.566 kb on - strand at 587.610 kb on - strand at 587.624 kb on + strand at 587.631 kb on + strand at 587.722 kb on - strand at 587.740 kb on - strand at 587.760 kb on - strand at 587.816 kb on + strand at 587.819 kb on - strand at 587.907 kb on - strand, within CA265_RS02355 at 587.926 kb on - strand, within CA265_RS02355 at 587.936 kb on + strand, within CA265_RS02355 at 587.967 kb on - strand, within CA265_RS02355 at 588.008 kb on - strand, within CA265_RS02355 at 588.036 kb on - strand, within CA265_RS02355 at 588.058 kb on - strand, within CA265_RS02355 at 588.072 kb on + strand, within CA265_RS02355 at 588.128 kb on - strand, within CA265_RS02355 at 588.131 kb on + strand at 588.151 kb on + strand, within CA265_RS02355 at 588.179 kb on + strand, within CA265_RS02355 at 588.206 kb on - strand, within CA265_RS02355 at 590.167 kb on - strand at 590.227 kb on - strand at 590.229 kb on - strand at 590.286 kb on - strand at 590.296 kb on + strand at 590.297 kb on - strand at 590.301 kb on + strand at 590.304 kb on - strand at 590.329 kb on - strand at 590.384 kb on - strand, within CA265_RS02365 at 590.422 kb on - strand, within CA265_RS02365 at 590.440 kb on - strand at 590.441 kb on + strand, within CA265_RS02365 at 590.442 kb on - strand, within CA265_RS02365 at 590.453 kb on + strand, within CA265_RS02365 at 590.454 kb on - strand, within CA265_RS02365 at 590.464 kb on + strand, within CA265_RS02365 at 590.478 kb on - strand, within CA265_RS02365 at 590.493 kb on - strand, within CA265_RS02365 at 590.537 kb on - strand, within CA265_RS02365 at 590.548 kb on + strand, within CA265_RS02365 at 590.549 kb on - strand, within CA265_RS02365 at 590.576 kb on + strand, within CA265_RS02365 at 590.585 kb on - strand, within CA265_RS02365 at 590.667 kb on + strand, within CA265_RS02365 at 590.689 kb on - strand, within CA265_RS02365 at 590.772 kb on + strand, within CA265_RS02365 at 590.787 kb on + strand, within CA265_RS02365 at 590.788 kb on - strand, within CA265_RS02365 at 590.790 kb on - strand, within CA265_RS02365 at 590.790 kb on - strand, within CA265_RS02365 at 590.831 kb on - strand, within CA265_RS02365 at 590.836 kb on + strand, within CA265_RS02365 at 590.900 kb on + strand, within CA265_RS02365 at 590.941 kb on + strand, within CA265_RS02365 at 590.973 kb on - strand at 590.973 kb on - strand at 591.107 kb on - strand at 591.132 kb on + strand, within CA265_RS02370
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cisplatin 0.01 mg/ml remove 587,330 + +0.3 587,408 + -1.0 587,490 + +0.2 587,496 + -0.8 587,510 + -0.1 587,538 - -0.1 587,561 - +0.3 587,566 - +0.6 587,610 - -0.2 587,624 + -1.3 587,631 + -1.0 587,722 - -0.1 587,740 - +0.4 587,760 - +0.2 587,816 + -0.6 587,819 - -2.7 587,907 - CA265_RS02355 0.16 -1.1 587,926 - CA265_RS02355 0.21 -0.3 587,936 + CA265_RS02355 0.23 -2.1 587,967 - CA265_RS02355 0.31 +0.1 588,008 - CA265_RS02355 0.41 -0.4 588,036 - CA265_RS02355 0.47 -0.9 588,058 - CA265_RS02355 0.53 +0.4 588,072 + CA265_RS02355 0.56 -0.1 588,128 - CA265_RS02355 0.70 -2.1 588,131 + -1.0 588,151 + CA265_RS02355 0.75 -1.8 588,179 + CA265_RS02355 0.82 -0.3 588,206 - CA265_RS02355 0.89 -0.2 590,167 - -0.9 590,227 - +0.2 590,229 - +0.6 590,286 - +0.7 590,296 + +0.0 590,297 - -1.3 590,301 + -1.0 590,304 - +0.7 590,329 - +0.4 590,384 - CA265_RS02365 0.14 +1.0 590,422 - CA265_RS02365 0.19 +0.2 590,440 - +1.2 590,441 + CA265_RS02365 0.22 -0.2 590,442 - CA265_RS02365 0.22 -0.1 590,453 + CA265_RS02365 0.23 +0.4 590,454 - CA265_RS02365 0.23 -0.7 590,464 + CA265_RS02365 0.25 +0.3 590,478 - CA265_RS02365 0.27 +0.0 590,493 - CA265_RS02365 0.28 -0.0 590,537 - CA265_RS02365 0.34 +0.6 590,548 + CA265_RS02365 0.36 -0.8 590,549 - CA265_RS02365 0.36 -1.5 590,576 + CA265_RS02365 0.39 +0.3 590,585 - CA265_RS02365 0.41 +0.1 590,667 + CA265_RS02365 0.51 -2.2 590,689 - CA265_RS02365 0.54 +0.4 590,772 + CA265_RS02365 0.65 -0.4 590,787 + CA265_RS02365 0.67 +0.2 590,788 - CA265_RS02365 0.67 -0.4 590,790 - CA265_RS02365 0.67 +0.1 590,790 - CA265_RS02365 0.67 +0.6 590,831 - CA265_RS02365 0.73 +0.2 590,836 + CA265_RS02365 0.73 +0.6 590,900 + CA265_RS02365 0.82 -1.6 590,941 + CA265_RS02365 0.87 -0.2 590,973 - +1.6 590,973 - +0.2 591,107 - -1.1 591,132 + CA265_RS02370 0.11 -0.3
Or see this region's nucleotide sequence