Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS05085 and ABIE51_RS05090 are separated by 72 nucleotides ABIE51_RS05090 and ABIE51_RS05095 are separated by 9 nucleotides ABIE51_RS05095 and ABIE51_RS05100 are separated by 17 nucleotides
ABIE51_RS05085: ABIE51_RS05085 - Tol-Pal system beta propeller repeat protein TolB, at 1,099,382 to 1,100,698
_RS05085
ABIE51_RS05090: ABIE51_RS05090 - peptidoglycan-associated lipoprotein Pal, at 1,100,771 to 1,101,280
_RS05090
ABIE51_RS05095: ABIE51_RS05095 - tol-pal system protein YbgF, at 1,101,290 to 1,102,093
_RS05095
ABIE51_RS05100: ABIE51_RS05100 - 7-carboxy-7-deazaguanine synthase QueE, at 1,102,111 to 1,102,788
_RS05100
Position (kb)
1100
1101
1102 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1100.699 kb on + strand at 1100.699 kb on + strand at 1100.699 kb on + strand at 1100.700 kb on - strand at 1100.701 kb on + strand at 1100.701 kb on + strand at 1100.701 kb on + strand at 1100.701 kb on + strand at 1100.702 kb on - strand at 1100.714 kb on + strand at 1100.714 kb on + strand at 1100.714 kb on + strand at 1100.715 kb on - strand at 1100.715 kb on - strand at 1100.715 kb on - strand at 1100.718 kb on + strand at 1100.718 kb on + strand at 1100.718 kb on + strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.719 kb on - strand at 1100.722 kb on + strand at 1100.722 kb on + strand at 1100.723 kb on - strand at 1100.723 kb on - strand at 1100.723 kb on - strand at 1100.723 kb on - strand at 1100.766 kb on + strand at 1100.766 kb on + strand at 1100.766 kb on + strand at 1101.278 kb on + strand at 1101.278 kb on + strand at 1101.278 kb on + strand at 1101.278 kb on + strand at 1101.279 kb on - strand at 1101.279 kb on - strand at 1101.279 kb on - strand at 1101.279 kb on - strand at 1101.281 kb on - strand at 1101.304 kb on - strand at 1101.304 kb on - strand at 1101.536 kb on + strand, within ABIE51_RS05095 at 1101.556 kb on + strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.557 kb on - strand, within ABIE51_RS05095 at 1101.674 kb on + strand, within ABIE51_RS05095 at 1101.675 kb on - strand, within ABIE51_RS05095 at 1101.722 kb on + strand, within ABIE51_RS05095 at 1101.722 kb on + strand, within ABIE51_RS05095 at 1101.723 kb on - strand, within ABIE51_RS05095 at 1101.758 kb on + strand, within ABIE51_RS05095 at 1101.758 kb on + strand, within ABIE51_RS05095 at 1101.759 kb on - strand, within ABIE51_RS05095 at 1101.815 kb on + strand, within ABIE51_RS05095 at 1101.815 kb on + strand, within ABIE51_RS05095 at 1101.815 kb on + strand, within ABIE51_RS05095 at 1101.816 kb on - strand, within ABIE51_RS05095 at 1101.816 kb on - strand, within ABIE51_RS05095 at 1101.816 kb on - strand, within ABIE51_RS05095 at 1101.833 kb on + strand, within ABIE51_RS05095 at 1101.834 kb on - strand, within ABIE51_RS05095 at 1101.834 kb on - strand, within ABIE51_RS05095 at 1101.834 kb on - strand, within ABIE51_RS05095 at 1101.851 kb on + strand, within ABIE51_RS05095 at 1101.851 kb on + strand, within ABIE51_RS05095 at 1101.854 kb on + strand, within ABIE51_RS05095 at 1101.854 kb on + strand, within ABIE51_RS05095 at 1101.854 kb on + strand, within ABIE51_RS05095 at 1101.854 kb on + strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.855 kb on - strand, within ABIE51_RS05095 at 1101.869 kb on + strand, within ABIE51_RS05095 at 1101.869 kb on + strand, within ABIE51_RS05095 at 1101.869 kb on + strand, within ABIE51_RS05095 at 1101.870 kb on - strand, within ABIE51_RS05095 at 1101.870 kb on - strand, within ABIE51_RS05095 at 1101.870 kb on - strand, within ABIE51_RS05095 at 1101.870 kb on - strand, within ABIE51_RS05095 at 1101.967 kb on - strand, within ABIE51_RS05095 at 1102.258 kb on + strand, within ABIE51_RS05100 at 1102.258 kb on + strand, within ABIE51_RS05100 at 1102.258 kb on + strand, within ABIE51_RS05100 at 1102.259 kb on - strand, within ABIE51_RS05100 at 1102.273 kb on + strand, within ABIE51_RS05100 at 1102.274 kb on - strand, within ABIE51_RS05100 at 1102.274 kb on - strand, within ABIE51_RS05100
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,100,699 + +0.3 1,100,699 + -0.1 1,100,699 + +1.0 1,100,700 - -2.0 1,100,701 + -0.5 1,100,701 + +0.0 1,100,701 + -0.9 1,100,701 + +0.1 1,100,702 - -0.3 1,100,714 + +0.0 1,100,714 + +0.2 1,100,714 + +0.8 1,100,715 - -0.6 1,100,715 - -0.5 1,100,715 - -0.4 1,100,718 + -0.3 1,100,718 + +1.0 1,100,718 + -0.1 1,100,719 - -0.3 1,100,719 - +0.5 1,100,719 - -0.4 1,100,719 - -0.3 1,100,719 - +0.1 1,100,719 - -1.2 1,100,719 - -0.1 1,100,719 - -0.1 1,100,719 - -1.1 1,100,719 - -1.1 1,100,722 + -0.0 1,100,722 + -0.3 1,100,723 - -0.8 1,100,723 - -0.7 1,100,723 - -0.7 1,100,723 - +0.1 1,100,766 + +0.3 1,100,766 + -0.4 1,100,766 + -0.4 1,101,278 + +0.2 1,101,278 + +0.2 1,101,278 + +0.2 1,101,278 + -0.1 1,101,279 - -0.5 1,101,279 - -0.5 1,101,279 - -0.0 1,101,279 - +0.4 1,101,281 - +1.0 1,101,304 - -0.1 1,101,304 - +0.2 1,101,536 + ABIE51_RS05095 0.31 +0.5 1,101,556 + ABIE51_RS05095 0.33 +0.6 1,101,557 - ABIE51_RS05095 0.33 +3.4 1,101,557 - ABIE51_RS05095 0.33 +0.7 1,101,557 - ABIE51_RS05095 0.33 +0.2 1,101,557 - ABIE51_RS05095 0.33 -0.4 1,101,557 - ABIE51_RS05095 0.33 -0.7 1,101,557 - ABIE51_RS05095 0.33 +0.1 1,101,557 - ABIE51_RS05095 0.33 +0.6 1,101,557 - ABIE51_RS05095 0.33 -0.3 1,101,557 - ABIE51_RS05095 0.33 -0.6 1,101,674 + ABIE51_RS05095 0.48 -0.2 1,101,675 - ABIE51_RS05095 0.48 +0.2 1,101,722 + ABIE51_RS05095 0.54 -0.0 1,101,722 + ABIE51_RS05095 0.54 -0.2 1,101,723 - ABIE51_RS05095 0.54 +1.5 1,101,758 + ABIE51_RS05095 0.58 +0.1 1,101,758 + ABIE51_RS05095 0.58 -0.1 1,101,759 - ABIE51_RS05095 0.58 +0.4 1,101,815 + ABIE51_RS05095 0.65 +1.0 1,101,815 + ABIE51_RS05095 0.65 -0.2 1,101,815 + ABIE51_RS05095 0.65 -1.4 1,101,816 - ABIE51_RS05095 0.65 -0.1 1,101,816 - ABIE51_RS05095 0.65 +0.4 1,101,816 - ABIE51_RS05095 0.65 -0.6 1,101,833 + ABIE51_RS05095 0.68 -0.4 1,101,834 - ABIE51_RS05095 0.68 +0.8 1,101,834 - ABIE51_RS05095 0.68 -0.6 1,101,834 - ABIE51_RS05095 0.68 -0.0 1,101,851 + ABIE51_RS05095 0.70 -0.8 1,101,851 + ABIE51_RS05095 0.70 -0.1 1,101,854 + ABIE51_RS05095 0.70 -0.0 1,101,854 + ABIE51_RS05095 0.70 -0.1 1,101,854 + ABIE51_RS05095 0.70 -0.9 1,101,854 + ABIE51_RS05095 0.70 -0.1 1,101,855 - ABIE51_RS05095 0.70 -0.6 1,101,855 - ABIE51_RS05095 0.70 -0.2 1,101,855 - ABIE51_RS05095 0.70 +0.6 1,101,855 - ABIE51_RS05095 0.70 +0.7 1,101,855 - ABIE51_RS05095 0.70 +0.2 1,101,855 - ABIE51_RS05095 0.70 -0.4 1,101,855 - ABIE51_RS05095 0.70 -0.1 1,101,869 + ABIE51_RS05095 0.72 +0.1 1,101,869 + ABIE51_RS05095 0.72 +0.0 1,101,869 + ABIE51_RS05095 0.72 +0.6 1,101,870 - ABIE51_RS05095 0.72 +0.0 1,101,870 - ABIE51_RS05095 0.72 +0.3 1,101,870 - ABIE51_RS05095 0.72 +0.8 1,101,870 - ABIE51_RS05095 0.72 +0.2 1,101,967 - ABIE51_RS05095 0.84 -0.5 1,102,258 + ABIE51_RS05100 0.22 -0.7 1,102,258 + ABIE51_RS05100 0.22 -0.1 1,102,258 + ABIE51_RS05100 0.22 +0.7 1,102,259 - ABIE51_RS05100 0.22 -1.6 1,102,273 + ABIE51_RS05100 0.24 -0.7 1,102,274 - ABIE51_RS05100 0.24 +0.7 1,102,274 - ABIE51_RS05100 0.24 -0.0
Or see this region's nucleotide sequence