Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02430 and ABIE51_RS02435 are separated by 101 nucleotides ABIE51_RS02435 and ABIE51_RS02440 overlap by 4 nucleotides ABIE51_RS02440 and ABIE51_RS02445 are separated by 113 nucleotides
ABIE51_RS02430: ABIE51_RS02430 - LysR family transcriptional regulator, at 540,681 to 541,592
_RS02430
ABIE51_RS02435: ABIE51_RS02435 - nuclear transport factor 2 family protein, at 541,694 to 542,023
_RS02435
ABIE51_RS02440: ABIE51_RS02440 - SDR family oxidoreductase, at 542,020 to 542,802
_RS02440
ABIE51_RS02445: ABIE51_RS02445 - alpha/beta hydrolase, at 542,916 to 543,707
_RS02445
Position (kb) 541
542
543 Strain fitness (log2 ratio) -1
0
1
2 at 540.699 kb on - strand at 540.763 kb on + strand at 540.763 kb on + strand at 540.764 kb on - strand at 540.766 kb on + strand at 540.766 kb on + strand at 540.766 kb on + strand at 540.772 kb on + strand at 540.772 kb on + strand at 540.772 kb on + strand at 540.773 kb on - strand, within ABIE51_RS02430 at 540.773 kb on - strand, within ABIE51_RS02430 at 540.773 kb on - strand, within ABIE51_RS02430 at 540.859 kb on + strand, within ABIE51_RS02430 at 540.860 kb on - strand, within ABIE51_RS02430 at 540.865 kb on + strand, within ABIE51_RS02430 at 541.608 kb on - strand at 541.627 kb on + strand at 541.627 kb on + strand at 541.628 kb on - strand at 541.628 kb on - strand at 541.628 kb on - strand at 541.730 kb on + strand, within ABIE51_RS02435 at 541.731 kb on - strand, within ABIE51_RS02435 at 541.865 kb on + strand, within ABIE51_RS02435 at 541.865 kb on + strand, within ABIE51_RS02435 at 541.865 kb on + strand, within ABIE51_RS02435 at 541.865 kb on + strand, within ABIE51_RS02435 at 541.866 kb on - strand, within ABIE51_RS02435 at 541.871 kb on + strand, within ABIE51_RS02435 at 541.871 kb on + strand, within ABIE51_RS02435 at 541.872 kb on - strand, within ABIE51_RS02435 at 541.872 kb on - strand, within ABIE51_RS02435 at 541.872 kb on - strand, within ABIE51_RS02435 at 541.872 kb on - strand, within ABIE51_RS02435 at 541.872 kb on - strand, within ABIE51_RS02435 at 541.913 kb on + strand, within ABIE51_RS02435 at 541.914 kb on - strand, within ABIE51_RS02435 at 541.970 kb on + strand, within ABIE51_RS02435 at 541.971 kb on - strand, within ABIE51_RS02435 at 542.079 kb on + strand at 542.176 kb on + strand, within ABIE51_RS02440 at 542.177 kb on - strand, within ABIE51_RS02440 at 542.473 kb on + strand, within ABIE51_RS02440 at 542.474 kb on - strand, within ABIE51_RS02440 at 542.633 kb on - strand, within ABIE51_RS02440 at 542.633 kb on - strand, within ABIE51_RS02440 at 542.767 kb on + strand at 542.767 kb on + strand at 542.768 kb on - strand at 542.800 kb on + strand at 542.801 kb on - strand at 543.016 kb on + strand, within ABIE51_RS02445 at 543.016 kb on + strand, within ABIE51_RS02445 at 543.017 kb on - strand, within ABIE51_RS02445
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 540,699 - +0.4 540,763 + +0.4 540,763 + -0.0 540,764 - +0.3 540,766 + +0.3 540,766 + +0.6 540,766 + -0.5 540,772 + -0.4 540,772 + -0.1 540,772 + +0.3 540,773 - ABIE51_RS02430 0.10 -0.2 540,773 - ABIE51_RS02430 0.10 +0.3 540,773 - ABIE51_RS02430 0.10 -1.2 540,859 + ABIE51_RS02430 0.20 -0.5 540,860 - ABIE51_RS02430 0.20 -0.2 540,865 + ABIE51_RS02430 0.20 -0.3 541,608 - -0.4 541,627 + +0.4 541,627 + -0.5 541,628 - +0.2 541,628 - -0.2 541,628 - -0.7 541,730 + ABIE51_RS02435 0.11 -0.0 541,731 - ABIE51_RS02435 0.11 +0.5 541,865 + ABIE51_RS02435 0.52 -0.3 541,865 + ABIE51_RS02435 0.52 +0.9 541,865 + ABIE51_RS02435 0.52 -0.5 541,865 + ABIE51_RS02435 0.52 -1.1 541,866 - ABIE51_RS02435 0.52 +0.7 541,871 + ABIE51_RS02435 0.54 +0.8 541,871 + ABIE51_RS02435 0.54 +0.1 541,872 - ABIE51_RS02435 0.54 +1.6 541,872 - ABIE51_RS02435 0.54 -0.0 541,872 - ABIE51_RS02435 0.54 +0.1 541,872 - ABIE51_RS02435 0.54 -0.6 541,872 - ABIE51_RS02435 0.54 -0.6 541,913 + ABIE51_RS02435 0.66 -0.6 541,914 - ABIE51_RS02435 0.67 +0.4 541,970 + ABIE51_RS02435 0.84 +0.2 541,971 - ABIE51_RS02435 0.84 -0.3 542,079 + +1.3 542,176 + ABIE51_RS02440 0.20 +1.1 542,177 - ABIE51_RS02440 0.20 -0.3 542,473 + ABIE51_RS02440 0.58 -0.5 542,474 - ABIE51_RS02440 0.58 -0.5 542,633 - ABIE51_RS02440 0.78 +0.0 542,633 - ABIE51_RS02440 0.78 +0.3 542,767 + +1.5 542,767 + -0.1 542,768 - +0.2 542,800 + +0.2 542,801 - -0.6 543,016 + ABIE51_RS02445 0.13 +1.9 543,016 + ABIE51_RS02445 0.13 -0.2 543,017 - ABIE51_RS02445 0.13 +0.3
Or see this region's nucleotide sequence