Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS01980 and ABIE51_RS01985 are separated by 62 nucleotides ABIE51_RS01985 and ABIE51_RS01990 are separated by 214 nucleotides ABIE51_RS01990 and ABIE51_RS01995 are separated by 114 nucleotides
ABIE51_RS01980: ABIE51_RS01980 - hypothetical protein, at 437,604 to 438,593
_RS01980
ABIE51_RS01985: ABIE51_RS01985 - DNA helicase II, at 438,656 to 440,848
_RS01985
ABIE51_RS01990: ABIE51_RS01990 - hypothetical protein, at 441,063 to 441,305
_RS01990
ABIE51_RS01995: ABIE51_RS01995 - 2OG-Fe(II) oxygenase, at 441,420 to 442,160
_RS01995
Position (kb) 438
439
440
441 Strain fitness (log2 ratio) -2
-1
0
1
2 at 437.722 kb on + strand, within ABIE51_RS01980 at 437.723 kb on - strand, within ABIE51_RS01980 at 437.723 kb on - strand, within ABIE51_RS01980 at 437.723 kb on - strand, within ABIE51_RS01980 at 437.770 kb on + strand, within ABIE51_RS01980 at 437.770 kb on + strand, within ABIE51_RS01980 at 437.770 kb on + strand, within ABIE51_RS01980 at 437.771 kb on - strand, within ABIE51_RS01980 at 437.771 kb on - strand, within ABIE51_RS01980 at 437.771 kb on - strand, within ABIE51_RS01980 at 437.869 kb on + strand, within ABIE51_RS01980 at 437.870 kb on - strand, within ABIE51_RS01980 at 437.956 kb on + strand, within ABIE51_RS01980 at 437.957 kb on - strand, within ABIE51_RS01980 at 437.957 kb on - strand, within ABIE51_RS01980 at 438.106 kb on + strand, within ABIE51_RS01980 at 438.106 kb on + strand, within ABIE51_RS01980 at 438.106 kb on + strand, within ABIE51_RS01980 at 438.107 kb on - strand, within ABIE51_RS01980 at 438.107 kb on - strand, within ABIE51_RS01980 at 438.107 kb on - strand, within ABIE51_RS01980 at 438.109 kb on + strand, within ABIE51_RS01980 at 438.109 kb on + strand, within ABIE51_RS01980 at 438.110 kb on - strand, within ABIE51_RS01980 at 438.110 kb on - strand, within ABIE51_RS01980 at 438.110 kb on - strand, within ABIE51_RS01980 at 438.110 kb on - strand, within ABIE51_RS01980 at 438.154 kb on + strand, within ABIE51_RS01980 at 438.154 kb on + strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.155 kb on - strand, within ABIE51_RS01980 at 438.644 kb on + strand at 438.644 kb on + strand at 438.644 kb on + strand at 438.645 kb on - strand at 438.649 kb on + strand at 438.728 kb on + strand at 438.728 kb on + strand at 438.728 kb on + strand at 438.728 kb on + strand at 438.729 kb on - strand at 438.729 kb on - strand at 438.729 kb on - strand at 438.729 kb on - strand at 438.729 kb on - strand at 438.729 kb on - strand at 439.014 kb on + strand, within ABIE51_RS01985 at 439.014 kb on + strand, within ABIE51_RS01985 at 439.178 kb on + strand, within ABIE51_RS01985 at 439.179 kb on - strand, within ABIE51_RS01985 at 439.179 kb on - strand, within ABIE51_RS01985 at 439.179 kb on - strand, within ABIE51_RS01985 at 439.346 kb on + strand, within ABIE51_RS01985 at 439.347 kb on - strand, within ABIE51_RS01985 at 439.347 kb on - strand, within ABIE51_RS01985 at 439.347 kb on - strand, within ABIE51_RS01985 at 439.419 kb on - strand, within ABIE51_RS01985 at 439.505 kb on + strand, within ABIE51_RS01985 at 439.505 kb on + strand, within ABIE51_RS01985 at 439.506 kb on - strand, within ABIE51_RS01985 at 439.506 kb on - strand, within ABIE51_RS01985 at 439.506 kb on - strand, within ABIE51_RS01985 at 439.628 kb on + strand, within ABIE51_RS01985 at 439.628 kb on + strand, within ABIE51_RS01985 at 439.629 kb on - strand, within ABIE51_RS01985 at 439.787 kb on + strand, within ABIE51_RS01985 at 439.787 kb on + strand, within ABIE51_RS01985 at 439.787 kb on + strand, within ABIE51_RS01985 at 439.787 kb on + strand, within ABIE51_RS01985 at 439.788 kb on - strand, within ABIE51_RS01985 at 439.838 kb on + strand, within ABIE51_RS01985 at 439.839 kb on - strand, within ABIE51_RS01985 at 439.839 kb on - strand, within ABIE51_RS01985 at 440.138 kb on + strand, within ABIE51_RS01985 at 440.138 kb on + strand, within ABIE51_RS01985 at 440.139 kb on - strand, within ABIE51_RS01985 at 440.274 kb on - strand, within ABIE51_RS01985 at 440.462 kb on + strand, within ABIE51_RS01985 at 440.462 kb on + strand, within ABIE51_RS01985 at 440.463 kb on - strand, within ABIE51_RS01985 at 440.504 kb on + strand, within ABIE51_RS01985 at 440.504 kb on + strand, within ABIE51_RS01985 at 440.504 kb on + strand, within ABIE51_RS01985 at 440.505 kb on - strand, within ABIE51_RS01985 at 440.505 kb on - strand, within ABIE51_RS01985 at 440.505 kb on - strand, within ABIE51_RS01985 at 440.540 kb on + strand, within ABIE51_RS01985 at 440.540 kb on + strand, within ABIE51_RS01985 at 440.540 kb on + strand, within ABIE51_RS01985 at 440.541 kb on - strand, within ABIE51_RS01985 at 440.541 kb on - strand, within ABIE51_RS01985 at 440.541 kb on - strand, within ABIE51_RS01985 at 440.624 kb on + strand, within ABIE51_RS01985 at 440.625 kb on - strand, within ABIE51_RS01985 at 440.751 kb on - strand at 440.825 kb on + strand at 440.826 kb on - strand at 440.861 kb on + strand at 440.861 kb on + strand at 440.862 kb on - strand at 440.969 kb on - strand at 440.969 kb on - strand at 441.053 kb on + strand at 441.053 kb on + strand at 441.053 kb on + strand at 441.054 kb on - strand at 441.408 kb on + strand at 441.408 kb on + strand at 441.421 kb on + strand at 441.422 kb on - strand at 441.422 kb on - strand at 441.422 kb on - strand at 441.725 kb on - strand, within ABIE51_RS01995 at 441.725 kb on - strand, within ABIE51_RS01995 at 441.725 kb on - strand, within ABIE51_RS01995 at 441.725 kb on - strand, within ABIE51_RS01995 at 441.725 kb on - strand, within ABIE51_RS01995 at 441.740 kb on - strand, within ABIE51_RS01995 at 441.818 kb on - strand, within ABIE51_RS01995
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 437,722 + ABIE51_RS01980 0.12 -0.1 437,723 - ABIE51_RS01980 0.12 -1.5 437,723 - ABIE51_RS01980 0.12 +0.3 437,723 - ABIE51_RS01980 0.12 +0.1 437,770 + ABIE51_RS01980 0.17 +0.1 437,770 + ABIE51_RS01980 0.17 -0.1 437,770 + ABIE51_RS01980 0.17 -0.2 437,771 - ABIE51_RS01980 0.17 -0.2 437,771 - ABIE51_RS01980 0.17 -2.3 437,771 - ABIE51_RS01980 0.17 +0.0 437,869 + ABIE51_RS01980 0.27 +0.1 437,870 - ABIE51_RS01980 0.27 -0.1 437,956 + ABIE51_RS01980 0.36 +1.1 437,957 - ABIE51_RS01980 0.36 -0.3 437,957 - ABIE51_RS01980 0.36 +0.2 438,106 + ABIE51_RS01980 0.51 -1.7 438,106 + ABIE51_RS01980 0.51 -0.2 438,106 + ABIE51_RS01980 0.51 +0.8 438,107 - ABIE51_RS01980 0.51 -1.3 438,107 - ABIE51_RS01980 0.51 +0.4 438,107 - ABIE51_RS01980 0.51 -0.1 438,109 + ABIE51_RS01980 0.51 -0.0 438,109 + ABIE51_RS01980 0.51 +0.2 438,110 - ABIE51_RS01980 0.51 +0.0 438,110 - ABIE51_RS01980 0.51 +0.1 438,110 - ABIE51_RS01980 0.51 +0.2 438,110 - ABIE51_RS01980 0.51 +0.1 438,154 + ABIE51_RS01980 0.56 +0.7 438,154 + ABIE51_RS01980 0.56 +0.1 438,155 - ABIE51_RS01980 0.56 +0.0 438,155 - ABIE51_RS01980 0.56 -0.2 438,155 - ABIE51_RS01980 0.56 -0.4 438,155 - ABIE51_RS01980 0.56 +1.1 438,155 - ABIE51_RS01980 0.56 +0.5 438,155 - ABIE51_RS01980 0.56 -0.1 438,155 - ABIE51_RS01980 0.56 +0.5 438,155 - ABIE51_RS01980 0.56 +0.3 438,644 + -0.7 438,644 + -0.2 438,644 + -2.2 438,645 - -0.0 438,649 + +0.4 438,728 + -0.1 438,728 + -0.4 438,728 + +0.2 438,728 + -0.2 438,729 - -0.9 438,729 - +0.1 438,729 - +0.6 438,729 - +0.2 438,729 - +2.7 438,729 - -0.1 439,014 + ABIE51_RS01985 0.16 +0.1 439,014 + ABIE51_RS01985 0.16 +1.9 439,178 + ABIE51_RS01985 0.24 +0.6 439,179 - ABIE51_RS01985 0.24 +0.0 439,179 - ABIE51_RS01985 0.24 +0.3 439,179 - ABIE51_RS01985 0.24 -2.1 439,346 + ABIE51_RS01985 0.31 -0.3 439,347 - ABIE51_RS01985 0.32 -0.9 439,347 - ABIE51_RS01985 0.32 -0.3 439,347 - ABIE51_RS01985 0.32 -0.7 439,419 - ABIE51_RS01985 0.35 +0.9 439,505 + ABIE51_RS01985 0.39 -0.1 439,505 + ABIE51_RS01985 0.39 +0.2 439,506 - ABIE51_RS01985 0.39 +0.7 439,506 - ABIE51_RS01985 0.39 +0.3 439,506 - ABIE51_RS01985 0.39 +0.9 439,628 + ABIE51_RS01985 0.44 -0.2 439,628 + ABIE51_RS01985 0.44 -0.1 439,629 - ABIE51_RS01985 0.44 +0.5 439,787 + ABIE51_RS01985 0.52 -0.7 439,787 + ABIE51_RS01985 0.52 +0.8 439,787 + ABIE51_RS01985 0.52 -0.7 439,787 + ABIE51_RS01985 0.52 -0.9 439,788 - ABIE51_RS01985 0.52 -0.7 439,838 + ABIE51_RS01985 0.54 -0.3 439,839 - ABIE51_RS01985 0.54 -0.2 439,839 - ABIE51_RS01985 0.54 -0.5 440,138 + ABIE51_RS01985 0.68 -0.1 440,138 + ABIE51_RS01985 0.68 +0.0 440,139 - ABIE51_RS01985 0.68 +1.0 440,274 - ABIE51_RS01985 0.74 -1.0 440,462 + ABIE51_RS01985 0.82 +1.1 440,462 + ABIE51_RS01985 0.82 +0.3 440,463 - ABIE51_RS01985 0.82 +0.3 440,504 + ABIE51_RS01985 0.84 -0.3 440,504 + ABIE51_RS01985 0.84 +0.5 440,504 + ABIE51_RS01985 0.84 -1.1 440,505 - ABIE51_RS01985 0.84 +0.1 440,505 - ABIE51_RS01985 0.84 +1.0 440,505 - ABIE51_RS01985 0.84 +0.2 440,540 + ABIE51_RS01985 0.86 +0.6 440,540 + ABIE51_RS01985 0.86 -0.2 440,540 + ABIE51_RS01985 0.86 -0.5 440,541 - ABIE51_RS01985 0.86 +0.6 440,541 - ABIE51_RS01985 0.86 -0.8 440,541 - ABIE51_RS01985 0.86 -0.0 440,624 + ABIE51_RS01985 0.90 -0.9 440,625 - ABIE51_RS01985 0.90 -0.2 440,751 - +0.1 440,825 + +0.9 440,826 - -0.3 440,861 + -0.3 440,861 + -0.0 440,862 - -0.2 440,969 - +1.1 440,969 - -0.2 441,053 + +0.0 441,053 + -0.1 441,053 + +0.3 441,054 - -0.6 441,408 + +0.0 441,408 + +0.1 441,421 + -0.6 441,422 - -0.3 441,422 - +0.2 441,422 - -0.1 441,725 - ABIE51_RS01995 0.41 +0.1 441,725 - ABIE51_RS01995 0.41 +0.2 441,725 - ABIE51_RS01995 0.41 -0.9 441,725 - ABIE51_RS01995 0.41 -0.6 441,725 - ABIE51_RS01995 0.41 -0.2 441,740 - ABIE51_RS01995 0.43 +0.1 441,818 - ABIE51_RS01995 0.54 +0.2
Or see this region's nucleotide sequence