Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1447 and SMa1450 are separated by 488 nucleotides SMa1450 and SMa1452 are separated by 24 nucleotides SMa1452 and SMa1454 are separated by 121 nucleotides
SMa1447: SMa1447 - Permease, MFS, at 797,393 to 798,706
SMa1447
SMa1450: SMa1450 - thiolase, at 799,195 to 800,385
SMa1450
SMa1452: SMa1452 - hypothetical protein, at 800,410 to 801,177
SMa1452
SMa1454: SMa1454 - AraC family transcriptional regulator, at 801,299 to 802,342
SMa1454
Position (kb) 799
800
801 Strain fitness (log2 ratio) -1
0
1
2
3 at 798.315 kb on + strand, within SMa1447 at 798.689 kb on + strand at 799.084 kb on + strand at 799.084 kb on + strand at 799.084 kb on + strand at 799.084 kb on + strand at 799.085 kb on - strand at 799.085 kb on - strand at 799.088 kb on + strand at 799.088 kb on + strand at 799.088 kb on + strand at 799.088 kb on + strand at 799.089 kb on - strand at 799.089 kb on - strand at 799.092 kb on + strand at 799.092 kb on + strand at 799.096 kb on + strand at 799.096 kb on + strand at 799.096 kb on + strand at 799.097 kb on - strand at 799.097 kb on - strand at 799.097 kb on - strand at 799.205 kb on - strand at 799.841 kb on + strand, within SMa1450 at 799.841 kb on + strand, within SMa1450 at 799.842 kb on - strand, within SMa1450 at 799.842 kb on - strand, within SMa1450 at 799.872 kb on - strand, within SMa1450 at 799.872 kb on - strand, within SMa1450 at 799.922 kb on + strand, within SMa1450 at 800.009 kb on + strand, within SMa1450 at 800.469 kb on + strand at 800.469 kb on + strand at 800.469 kb on + strand at 800.470 kb on - strand at 800.470 kb on - strand at 800.470 kb on - strand at 800.481 kb on + strand at 800.481 kb on + strand at 800.481 kb on + strand at 800.501 kb on + strand, within SMa1452 at 800.502 kb on - strand, within SMa1452 at 800.502 kb on - strand, within SMa1452 at 800.593 kb on - strand, within SMa1452 at 800.733 kb on + strand, within SMa1452 at 800.734 kb on - strand, within SMa1452 at 801.153 kb on + strand at 801.225 kb on - strand at 801.229 kb on + strand at 801.229 kb on + strand at 801.230 kb on - strand at 801.230 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 798,315 + SMa1447 0.70 +0.3 798,689 + -0.2 799,084 + -0.2 799,084 + -0.7 799,084 + +0.4 799,084 + +0.6 799,085 - -0.4 799,085 - -0.0 799,088 + +1.6 799,088 + -0.2 799,088 + +0.1 799,088 + -0.4 799,089 - +0.7 799,089 - +0.3 799,092 + -0.2 799,092 + -0.3 799,096 + +1.5 799,096 + -0.7 799,096 + +1.3 799,097 - -0.9 799,097 - -0.2 799,097 - +0.5 799,205 - +0.4 799,841 + SMa1450 0.54 +0.6 799,841 + SMa1450 0.54 +0.4 799,842 - SMa1450 0.54 +0.1 799,842 - SMa1450 0.54 +0.7 799,872 - SMa1450 0.57 +1.3 799,872 - SMa1450 0.57 +0.7 799,922 + SMa1450 0.61 -0.3 800,009 + SMa1450 0.68 +0.3 800,469 + +0.0 800,469 + +0.1 800,469 + -0.5 800,470 - +0.5 800,470 - -0.2 800,470 - -0.2 800,481 + -0.5 800,481 + -0.9 800,481 + +0.3 800,501 + SMa1452 0.12 -0.5 800,502 - SMa1452 0.12 -0.2 800,502 - SMa1452 0.12 -0.1 800,593 - SMa1452 0.24 +0.2 800,733 + SMa1452 0.42 +0.8 800,734 - SMa1452 0.42 -0.2 801,153 + +0.0 801,225 - +3.0 801,229 + +0.5 801,229 + +0.3 801,230 - +0.2 801,230 - +0.2
Or see this region's nucleotide sequence