Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35920

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,505,060	+		RR42_RS35915	0.57	+0.3
3,505,061	-		RR42_RS35915	0.57	-1.1
3,505,373	+		RR42_RS35915	0.83	+0.3
3,505,374	-		RR42_RS35915	0.83	+0.9
3,505,380	+		RR42_RS35915	0.83	+0.3
3,505,420	+		RR42_RS35915	0.87	-0.9
3,505,420	+		RR42_RS35915	0.87	+1.3
3,505,421	-		RR42_RS35915	0.87	+0.1
3,505,679	-				+0.4
3,505,807	-		RR42_RS35920	0.19	-0.4
3,505,808	+		RR42_RS35920	0.20	+0.8
3,505,808	+		RR42_RS35920	0.20	+0.3
3,505,808	+		RR42_RS35920	0.20	-1.2
3,505,808	+		RR42_RS35920	0.20	+0.2
3,505,809	-		RR42_RS35920	0.20	-1.9
3,505,809	-		RR42_RS35920	0.20	+0.3
3,505,809	-		RR42_RS35920	0.20	-0.3
3,505,809	-		RR42_RS35920	0.20	-0.9
3,505,809	-		RR42_RS35920	0.20	-0.1
3,505,809	-		RR42_RS35920	0.20	-0.4
3,505,809	-		RR42_RS35920	0.20	-0.8
3,505,809	-		RR42_RS35920	0.20	+0.1
3,505,809	-		RR42_RS35920	0.20	-0.7
3,505,809	-		RR42_RS35920	0.20	-0.3
3,505,974	+		RR42_RS35920	0.45	+0.4
3,506,081	+		RR42_RS35920	0.62	-1.6
3,506,081	+		RR42_RS35920	0.62	+0.4
3,506,081	+		RR42_RS35920	0.62	+0.6
3,506,082	-		RR42_RS35920	0.62	-0.7
3,506,328	+				+0.0
3,506,328	+				-0.1
3,506,328	+				+0.6
3,506,329	-				+0.4
3,506,329	-				-1.0
3,506,339	+				+0.2
3,506,596	+		RR42_RS35925	0.36	+0.1
3,506,596	+		RR42_RS35925	0.36	+1.1
3,506,597	-		RR42_RS35925	0.36	-2.9
3,506,597	-		RR42_RS35925	0.36	+0.6
3,506,602	+		RR42_RS35925	0.37	-0.3
3,506,602	+		RR42_RS35925	0.37	-1.9
3,506,602	+		RR42_RS35925	0.37	-0.3
3,506,603	-		RR42_RS35925	0.37	-0.2
3,506,603	-		RR42_RS35925	0.37	+0.3
3,506,656	+		RR42_RS35925	0.45	+0.9
3,506,761	+		RR42_RS35925	0.60	-0.4
3,506,761	+		RR42_RS35925	0.60	-0.0
3,506,779	+		RR42_RS35925	0.63	+1.1
3,506,780	-		RR42_RS35925	0.63	+0.1
3,506,780	-		RR42_RS35925	0.63	-0.5
3,507,018	+				+0.2
3,507,064	+				-0.3
3,507,065	-				+0.5