Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35100

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,326,643	-		RR42_RS35095	0.50	-0.1
3,326,643	-		RR42_RS35095	0.50	-2.0
3,326,669	+		RR42_RS35095	0.52	-0.6
3,326,700	+		RR42_RS35095	0.55	+1.2
3,326,700	+		RR42_RS35095	0.55	-0.1
3,326,701	-		RR42_RS35095	0.55	+2.0
3,326,795	+		RR42_RS35095	0.63	+0.4
3,326,795	+		RR42_RS35095	0.63	+0.2
3,326,796	-		RR42_RS35095	0.63	+0.8
3,326,796	-		RR42_RS35095	0.63	+0.5
3,326,796	-		RR42_RS35095	0.63	-0.6
3,326,796	-		RR42_RS35095	0.63	-0.2
3,326,849	+		RR42_RS35095	0.68	+0.7
3,326,849	+		RR42_RS35095	0.68	+0.7
3,326,849	+		RR42_RS35095	0.68	+0.1
3,326,849	+		RR42_RS35095	0.68	-0.3
3,326,849	+		RR42_RS35095	0.68	-1.6
3,326,850	-		RR42_RS35095	0.68	-0.2
3,326,850	-		RR42_RS35095	0.68	+0.0
3,326,850	-		RR42_RS35095	0.68	+0.4
3,326,918	+		RR42_RS35095	0.74	-0.6
3,326,918	+		RR42_RS35095	0.74	+1.4
3,326,918	+		RR42_RS35095	0.74	-0.1
3,326,918	+		RR42_RS35095	0.74	-0.5
3,326,918	+		RR42_RS35095	0.74	-0.2
3,326,919	-		RR42_RS35095	0.74	-1.3
3,326,919	-		RR42_RS35095	0.74	-0.0
3,326,919	-		RR42_RS35095	0.74	+1.1
3,326,919	-		RR42_RS35095	0.74	-1.0
3,326,919	-		RR42_RS35095	0.74	+1.0
3,326,919	-		RR42_RS35095	0.74	-0.4
3,326,919	-		RR42_RS35095	0.74	+0.2
3,327,013	-		RR42_RS35095	0.82	+0.6
3,327,040	+		RR42_RS35095	0.84	+0.4
3,327,041	-		RR42_RS35095	0.84	-1.3
3,327,093	-		RR42_RS35095	0.89	-1.0
3,327,098	+		RR42_RS35095	0.89	+0.3
3,327,098	+		RR42_RS35095	0.89	-0.1
3,327,099	-		RR42_RS35095	0.89	-0.2
3,327,099	-		RR42_RS35095	0.89	+0.5
3,327,099	-		RR42_RS35095	0.89	-0.2
3,327,099	-		RR42_RS35095	0.89	-0.8
3,327,099	-		RR42_RS35095	0.89	+0.5
3,327,179	-				-0.2
3,327,286	+				+2.1
3,327,286	+				+0.8
3,327,286	+				+1.0
3,327,286	+				+2.0
3,327,287	-				+0.2
3,327,287	-				-0.2
3,327,320	-				-0.0
3,327,339	-				-1.4
3,327,385	+				-0.0
3,327,386	-				-0.5
3,327,386	-				+0.0
3,327,386	-				-1.1
3,327,386	-				-0.8
3,327,407	+				-0.3
3,327,407	+				-0.4
3,327,407	+				+2.0
3,327,408	-				+1.1
3,327,408	-				-0.5
3,327,553	+				-0.9
3,327,931	+		RR42_RS35100	0.62	-0.2
3,327,932	-		RR42_RS35100	0.62	-0.7
3,327,966	+		RR42_RS35100	0.68	+0.4
3,327,966	+		RR42_RS35100	0.68	-1.3
3,327,978	+		RR42_RS35100	0.70	-0.1
3,327,978	+		RR42_RS35100	0.70	+0.1
3,327,978	+		RR42_RS35100	0.70	-0.5
3,328,018	+		RR42_RS35100	0.77	+0.8
3,328,019	-		RR42_RS35100	0.77	+1.7
3,328,019	-		RR42_RS35100	0.77	+1.4
3,328,019	-		RR42_RS35100	0.77	-0.3
3,328,369	+				-0.1
3,328,370	-				+0.0
3,328,370	-				-0.6
3,328,370	-				-0.4
3,328,370	-				+0.2
3,328,599	-		RR42_RS35105	0.25	-0.8
3,328,599	-		RR42_RS35105	0.25	-0.9
3,328,599	-		RR42_RS35105	0.25	+0.1
3,328,632	+		RR42_RS35105	0.28	-0.1
3,328,633	-		RR42_RS35105	0.28	+1.0
3,328,745	-		RR42_RS35105	0.38	+2.2
3,328,745	-		RR42_RS35105	0.38	+1.2
3,328,745	-		RR42_RS35105	0.38	+0.2
3,328,962	+		RR42_RS35105	0.58	-0.8
3,328,963	-		RR42_RS35105	0.58	+1.4
3,329,101	+		RR42_RS35105	0.71	+1.6