Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33675

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,981,469	+				+0.3
2,981,470	-				-0.4
2,981,540	+				+0.4
2,981,540	+				+0.3
2,981,540	+				-1.5
2,981,540	+				-1.1
2,981,541	-				+1.3
2,981,541	-				-0.1
2,981,541	-				+1.2
2,981,601	+				+1.1
2,981,601	+				-1.8
2,981,602	-				+0.2
2,981,603	+				-1.4
2,981,603	+				+0.9
2,981,603	+				-0.4
2,981,603	+				+0.7
2,981,975	+		RR42_RS33670	0.50	-0.0
2,981,975	+		RR42_RS33670	0.50	-0.8
2,981,999	+		RR42_RS33670	0.53	-0.0
2,981,999	+		RR42_RS33670	0.53	+0.0
2,982,000	-		RR42_RS33670	0.53	-0.1
2,982,177	+		RR42_RS33670	0.73	+0.4
2,982,178	-		RR42_RS33670	0.73	+3.1
2,982,543	+		RR42_RS33675	0.15	-0.1
2,982,543	+		RR42_RS33675	0.15	+1.3
2,982,543	+		RR42_RS33675	0.15	-0.1
2,982,544	-		RR42_RS33675	0.15	-0.2
2,982,544	-		RR42_RS33675	0.15	-0.7
2,982,547	+		RR42_RS33675	0.16	+0.4
2,982,547	+		RR42_RS33675	0.16	+0.8
2,982,548	-		RR42_RS33675	0.16	+0.5
2,982,548	-		RR42_RS33675	0.16	-2.1
2,982,801	+		RR42_RS33675	0.48	+0.6
2,983,050	-		RR42_RS33675	0.80	+0.9
2,983,050	-		RR42_RS33675	0.80	+2.3
2,983,164	+				+0.9
2,983,201	+				-0.5
2,983,202	-				-0.0
2,983,202	-				-1.7
2,983,335	-				-1.1
2,983,460	+		RR42_RS33680	0.18	+1.9
2,983,460	+		RR42_RS33680	0.18	-0.3
2,983,460	+		RR42_RS33680	0.18	-0.1
2,983,565	+		RR42_RS33680	0.29	+0.1
2,983,566	-		RR42_RS33680	0.29	+0.5
2,983,566	-		RR42_RS33680	0.29	-0.4
2,983,566	-		RR42_RS33680	0.29	+3.2
2,983,868	+		RR42_RS33680	0.59	+0.5
2,983,868	+		RR42_RS33680	0.59	-0.7
2,983,869	-		RR42_RS33680	0.59	-0.9
2,983,932	+		RR42_RS33680	0.65	-0.8
2,983,933	-		RR42_RS33680	0.65	+0.9
2,984,166	-		RR42_RS33680	0.88	-0.4
2,984,166	-		RR42_RS33680	0.88	-0.1
2,984,184	+		RR42_RS33680	0.90	-0.2
2,984,184	+		RR42_RS33680	0.90	-0.2
2,984,185	-				+0.1