Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32925

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,785,862	+		RR42_RS32920	0.49	-1.4
2,785,862	+		RR42_RS32920	0.49	+0.7
2,785,862	+		RR42_RS32920	0.49	+0.3
2,785,863	-		RR42_RS32920	0.49	-1.2
2,785,950	-		RR42_RS32920	0.57	+0.5
2,785,959	+		RR42_RS32920	0.58	+0.6
2,786,018	+		RR42_RS32920	0.64	-0.1
2,786,019	-		RR42_RS32920	0.64	+0.8
2,786,045	+		RR42_RS32920	0.66	-0.4
2,786,046	-		RR42_RS32920	0.66	-1.1
2,786,046	-		RR42_RS32920	0.66	-0.2
2,786,216	+		RR42_RS32920	0.82	-0.4
2,786,217	-		RR42_RS32920	0.82	-1.7
2,786,217	-		RR42_RS32920	0.82	-0.4
2,786,217	-		RR42_RS32920	0.82	-0.3
2,786,385	-				+0.8
2,786,468	+				-0.4
2,786,468	+				+0.1
2,786,468	+				+0.4
2,786,468	+				-1.6
2,786,653	+				+2.4
2,786,739	+				-0.7
2,786,739	+				-0.9
2,786,781	-				-0.3
2,786,781	-				+1.6
2,786,912	-		RR42_RS32925	0.14	-1.7
2,786,942	-		RR42_RS32925	0.17	+0.1
2,786,951	-		RR42_RS32925	0.18	+0.3
2,787,070	+		RR42_RS32925	0.30	+0.0
2,787,071	-		RR42_RS32925	0.31	+0.5
2,787,071	-		RR42_RS32925	0.31	-0.9
2,787,081	+		RR42_RS32925	0.32	-0.3
2,787,124	+		RR42_RS32925	0.36	+0.8
2,787,124	+		RR42_RS32925	0.36	+0.1
2,787,124	+		RR42_RS32925	0.36	+0.5
2,787,125	-		RR42_RS32925	0.36	+0.6
2,787,268	+		RR42_RS32925	0.51	+0.0
2,787,268	+		RR42_RS32925	0.51	+0.9
2,787,268	+		RR42_RS32925	0.51	+1.1
2,787,287	-		RR42_RS32925	0.53	-1.5
2,787,289	-		RR42_RS32925	0.53	-1.7
2,787,463	+		RR42_RS32925	0.71	-0.7
2,787,464	-		RR42_RS32925	0.72	+0.8
2,787,464	-		RR42_RS32925	0.72	+0.7
2,787,469	+		RR42_RS32925	0.72	+1.1
2,787,470	-		RR42_RS32925	0.72	+0.4
2,787,496	+		RR42_RS32925	0.75	+1.6
2,787,496	+		RR42_RS32925	0.75	+1.3
2,787,497	-		RR42_RS32925	0.75	+1.4
2,787,497	-		RR42_RS32925	0.75	+0.1
2,787,505	+		RR42_RS32925	0.76	+0.2
2,787,506	-		RR42_RS32925	0.76	-0.0
2,787,516	+		RR42_RS32925	0.77	-0.4
2,787,621	+		RR42_RS32925	0.88	-0.4
2,787,869	+				-0.3
2,787,870	-				+0.8
2,787,913	-		RR42_RS32930	0.15	+0.6
2,787,913	-		RR42_RS32930	0.15	-1.2
2,787,913	-		RR42_RS32930	0.15	+0.9
2,787,960	+		RR42_RS32930	0.28	+0.3
2,788,197	+				-0.4
2,788,198	-				+0.5
2,788,324	+		RR42_RS32935	0.48	+0.6
2,788,324	+		RR42_RS32935	0.48	+0.1
2,788,324	+		RR42_RS32935	0.48	-1.3
2,788,324	+		RR42_RS32935	0.48	+0.6
2,788,325	-		RR42_RS32935	0.49	-0.0
2,788,325	-		RR42_RS32935	0.49	+0.3
2,788,325	-		RR42_RS32935	0.49	-0.5
2,788,350	+		RR42_RS32935	0.60	+0.3
2,788,350	+		RR42_RS32935	0.60	+0.3
2,788,461	+				+0.0
2,788,654	+				+0.6
2,788,654	+				-0.7
2,788,719	+				+0.4
2,788,719	+				+1.1
2,788,719	+				-0.2
2,788,719	+				-0.3
2,788,719	+				-0.8
2,788,719	+				-0.6
2,788,719	+				+3.7
2,788,719	+				-0.3
2,788,719	+				-0.3
2,788,719	+				+0.3
2,788,719	+				+0.1
2,788,719	+				-0.5
2,788,719	+				+0.8
2,788,719	+				+0.0
2,788,719	+				+0.2
2,788,720	-				+0.2
2,788,720	-				+0.1
2,788,720	-				+0.4
2,788,720	-				-0.1
2,788,720	-				+0.2
2,788,720	-				-1.0
2,788,720	-				-0.1
2,788,720	-				-0.1
2,788,720	-				+0.4
2,788,720	-				-0.9
2,788,720	-				-0.4
2,788,720	-				-1.0
2,788,720	-				-1.1
2,788,725	+				+0.2
2,788,725	+				-1.2
2,788,725	+				-0.1
2,788,725	+				-0.4
2,788,726	-				-1.2
2,788,726	-				+0.8