Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30640

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,248,151	-		RR42_RS30630	0.17	-0.4
2,248,151	-		RR42_RS30630	0.17	+0.4
2,248,151	-		RR42_RS30630	0.17	+1.6
2,248,151	-		RR42_RS30630	0.17	+1.8
2,248,213	+		RR42_RS30630	0.30	+0.4
2,248,213	+		RR42_RS30630	0.30	+2.2
2,248,213	+		RR42_RS30630	0.30	-1.0
2,248,214	-		RR42_RS30630	0.30	-0.0
2,248,214	-		RR42_RS30630	0.30	+0.7
2,248,214	-		RR42_RS30630	0.30	-1.1
2,248,219	+		RR42_RS30630	0.31	+0.3
2,248,219	+		RR42_RS30630	0.31	-0.1
2,248,219	+		RR42_RS30630	0.31	-0.3
2,248,220	-		RR42_RS30630	0.32	-1.4
2,248,237	+		RR42_RS30630	0.35	+0.3
2,248,237	+		RR42_RS30630	0.35	+0.3
2,248,376	-		RR42_RS30630	0.65	+0.8
2,248,575	+				-1.2
2,248,589	-				-1.7
2,248,594	+				-1.0
2,248,595	-				+1.0
2,248,658	+				-2.0
2,249,032	+				+0.8
2,249,118	-				-1.1
2,249,147	+				-1.4
2,249,267	+		RR42_RS30640	0.25	-3.3
2,249,267	+		RR42_RS30640	0.25	-1.5
2,249,268	-		RR42_RS30640	0.25	+0.4
2,249,288	-		RR42_RS30640	0.28	-1.4
2,249,495	+		RR42_RS30640	0.57	-1.7
2,249,495	+		RR42_RS30640	0.57	-1.0
2,249,496	-		RR42_RS30640	0.57	+0.6
2,249,496	-		RR42_RS30640	0.57	-2.2
2,249,496	-		RR42_RS30640	0.57	-0.6
2,249,551	+		RR42_RS30640	0.65	-0.3
2,249,564	+		RR42_RS30640	0.67	-0.9
2,249,564	+		RR42_RS30640	0.67	+2.0
2,249,565	-		RR42_RS30640	0.67	-3.3
2,249,565	-		RR42_RS30640	0.67	-0.6
2,249,571	+		RR42_RS30640	0.68	-1.7
2,249,571	+		RR42_RS30640	0.68	-1.0
2,249,572	-		RR42_RS30640	0.68	-1.2
2,249,878	+				-0.5
2,249,879	-				+0.9
2,249,880	+				+0.8
2,249,880	+				-0.5
2,249,880	+				+0.2
2,249,880	+				+1.4
2,249,881	-				-0.5
2,250,024	+				-0.4
2,250,024	+				-1.2
2,250,024	+				+0.4
2,250,025	-				-0.0
2,250,025	-				-0.5
2,250,025	-				-0.1
2,250,081	+				-1.5
2,250,081	+				+0.4
2,250,081	+				-0.8
2,250,081	+				-0.2
2,250,082	-				+0.1
2,250,082	-				-1.2
2,250,082	-				+0.8
2,250,084	+				+0.4
2,250,085	-				+0.1
2,250,087	+				+0.4
2,250,088	-				-0.4
2,250,141	+		RR42_RS30645	0.15	-0.2
2,250,141	+		RR42_RS30645	0.15	+0.6
2,250,141	+		RR42_RS30645	0.15	-0.0
2,250,142	-		RR42_RS30645	0.15	-1.4
2,250,142	-		RR42_RS30645	0.15	+0.9
2,250,142	-		RR42_RS30645	0.15	-0.5
2,250,143	+		RR42_RS30645	0.15	-0.6
2,250,143	+		RR42_RS30645	0.15	-1.9
2,250,144	-		RR42_RS30645	0.15	+0.4
2,250,144	-		RR42_RS30645	0.15	-0.5
2,250,201	+		RR42_RS30645	0.21	+1.2
2,250,201	+		RR42_RS30645	0.21	+0.0
2,250,270	+		RR42_RS30645	0.28	+0.2
2,250,270	+		RR42_RS30645	0.28	+1.6
2,250,270	+		RR42_RS30645	0.28	+0.0
2,250,271	-		RR42_RS30645	0.28	-0.4
2,250,271	-		RR42_RS30645	0.28	+0.9
2,250,271	-		RR42_RS30645	0.28	+0.7
2,250,325	+		RR42_RS30645	0.33	-0.1
2,250,325	+		RR42_RS30645	0.33	+0.0
2,250,556	-		RR42_RS30645	0.55	+0.0
2,250,556	-		RR42_RS30645	0.55	-0.1
2,250,556	-		RR42_RS30645	0.55	-0.0