Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27495

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,520,165	+		RR42_RS27490	0.67	+0.9
1,520,512	+				+0.7
1,520,513	-				+1.3
1,520,580	+				+0.2
1,520,580	+				-0.1
1,520,608	+				-0.5
1,520,608	+				+0.0
1,520,684	-				-1.5
1,520,692	-				+0.2
1,520,720	+				-0.3
1,521,127	+				-0.3
1,521,919	+				-0.4
1,521,920	-				-1.9
1,521,920	-				+0.1
1,521,920	-				+0.4
1,521,920	-				-0.2
1,521,920	-				+0.4
1,521,920	-				-0.5
1,521,920	-				-0.2
1,521,920	-				+0.7
1,521,959	+				-0.4
1,522,038	-				-0.3
1,522,048	+				+0.0
1,522,049	-				+0.1
1,522,049	-				-0.1
1,522,049	-				-0.0
1,522,049	-				-0.9
1,522,237	+		RR42_RS27495	0.12	-1.9
1,522,238	-		RR42_RS27495	0.12	-0.0
1,523,601	+		RR42_RS27495	0.25	+0.6
1,523,602	-		RR42_RS27495	0.25	-1.1
1,523,602	-		RR42_RS27495	0.25	-0.7
1,523,635	-		RR42_RS27495	0.26	-0.7
1,523,763	+		RR42_RS27495	0.27	-2.1
1,523,764	-		RR42_RS27495	0.27	+0.1
1,523,764	-		RR42_RS27495	0.27	+0.5
1,523,764	-		RR42_RS27495	0.27	-0.9
1,524,292	+		RR42_RS27495	0.33	-0.0
1,525,200	+		RR42_RS27495	0.42	+0.6
1,525,290	+		RR42_RS27495	0.43	+0.7
1,525,336	+		RR42_RS27495	0.43	+0.8
1,525,337	-		RR42_RS27495	0.43	-0.2
1,525,346	-		RR42_RS27495	0.43	-2.9
1,525,429	+		RR42_RS27495	0.44	-0.5
1,525,429	+		RR42_RS27495	0.44	-0.7
1,525,429	+		RR42_RS27495	0.44	-0.9
1,525,430	-		RR42_RS27495	0.44	+0.5
1,525,462	+		RR42_RS27495	0.44	-1.6
1,525,462	+		RR42_RS27495	0.44	+1.1
1,525,462	+		RR42_RS27495	0.44	-0.6
1,525,559	-		RR42_RS27495	0.45	-1.1
1,525,745	+		RR42_RS27495	0.47	-1.3
1,525,746	-		RR42_RS27495	0.47	-0.6
1,525,746	-		RR42_RS27495	0.47	-0.9
1,525,805	-		RR42_RS27495	0.48	-0.3
1,526,200	+		RR42_RS27495	0.52	-0.9
1,526,200	+		RR42_RS27495	0.52	-0.6
1,526,233	+		RR42_RS27495	0.52	+0.2
1,526,257	+		RR42_RS27495	0.53	-0.5
1,526,257	+		RR42_RS27495	0.53	+1.0
1,526,258	-		RR42_RS27495	0.53	-0.1
1,526,258	-		RR42_RS27495	0.53	+0.6
1,526,320	+		RR42_RS27495	0.53	+0.5
1,526,320	+		RR42_RS27495	0.53	-1.4
1,526,320	+		RR42_RS27495	0.53	+0.8
1,526,320	+		RR42_RS27495	0.53	-0.7
1,526,383	+		RR42_RS27495	0.54	-0.5
1,526,383	+		RR42_RS27495	0.54	-0.0
1,526,435	-		RR42_RS27495	0.54	-0.8
1,526,435	-		RR42_RS27495	0.54	-1.7
1,526,578	+		RR42_RS27495	0.56	+0.1
1,527,106	+		RR42_RS27495	0.61	-0.4
1,527,107	-		RR42_RS27495	0.61	+0.6
1,527,319	+		RR42_RS27495	0.63	-2.6
1,527,604	+		RR42_RS27495	0.66	-0.1
1,527,605	-		RR42_RS27495	0.66	+0.1
1,527,841	+		RR42_RS27495	0.69	+0.2
1,527,842	-		RR42_RS27495	0.69	+0.2
1,528,084	-		RR42_RS27495	0.71	-0.9
1,528,552	+		RR42_RS27495	0.76	-0.6
1,528,552	+		RR42_RS27495	0.76	-0.6
1,528,931	-		RR42_RS27495	0.80	+0.3
1,529,177	-		RR42_RS27495	0.82	+0.1
1,529,908	+		RR42_RS27495	0.90	-1.9
1,529,908	+		RR42_RS27495	0.90	-0.7
1,529,908	+		RR42_RS27495	0.90	+0.5
1,529,909	-		RR42_RS27495	0.90	-0.9
1,530,025	+				-0.4
1,530,025	+				+0.8
1,530,025	+				-2.5
1,530,026	-				-0.9
1,530,056	-				+0.2
1,530,056	-				-2.3
1,530,056	-				-0.1
1,530,468	+				+0.1
1,530,557	-				-0.6
1,530,564	+				+1.0
1,530,681	-				-1.3
1,530,856	+				-0.7
1,530,856	+				-0.8
1,530,856	+				-0.5
1,530,873	+				-0.4
1,530,979	+				-1.9
1,531,028	-				-0.4
1,531,028	-				-0.1
1,531,036	+				-0.5
1,531,037	-				+3.0
1,531,037	-				-0.2
1,531,037	-				+0.5
1,531,037	-				-0.1
1,531,096	+				-1.1
1,531,418	+				-1.0