Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20715

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
4,497,644	+		RR42_RS20710	0.35	-0.5
4,497,866	+		RR42_RS20710	0.55	+0.3
4,498,061	-		RR42_RS20710	0.73	-1.2
4,498,169	+		RR42_RS20710	0.82	-0.1
4,498,169	+		RR42_RS20710	0.82	+0.2
4,498,170	-		RR42_RS20710	0.82	-0.0
4,498,361	+				+0.3
4,498,384	+				+0.5
4,498,384	+				-0.2
4,498,595	-				-0.2
4,498,636	+				-0.5
4,498,636	+				+1.3
4,498,636	+				+0.8
4,498,637	-				-0.2
4,498,637	-				-0.1
4,498,637	-				-0.2
4,498,669	-				+0.5
4,498,883	+		RR42_RS20715	0.16	+0.6
4,498,883	+		RR42_RS20715	0.16	+1.3
4,498,883	+		RR42_RS20715	0.16	+0.7
4,498,883	+		RR42_RS20715	0.16	-0.4
4,498,884	-		RR42_RS20715	0.16	+0.0
4,498,884	-		RR42_RS20715	0.16	-1.4
4,499,198	+		RR42_RS20715	0.36	-1.1
4,499,198	+		RR42_RS20715	0.36	-2.7
4,499,412	-		RR42_RS20715	0.49	-0.0
4,499,546	+		RR42_RS20715	0.58	+1.3
4,499,546	+		RR42_RS20715	0.58	+0.3
4,499,804	+		RR42_RS20715	0.74	-0.3
4,499,804	+		RR42_RS20715	0.74	-1.0
4,499,875	+		RR42_RS20715	0.79	+0.9
4,499,875	+		RR42_RS20715	0.79	+0.4
4,499,875	+		RR42_RS20715	0.79	-0.2
4,499,876	-		RR42_RS20715	0.79	-0.5
4,499,912	+		RR42_RS20715	0.81	+0.3
4,499,912	+		RR42_RS20715	0.81	-0.1
4,499,912	+		RR42_RS20715	0.81	-0.1
4,499,913	-		RR42_RS20715	0.81	+0.6
4,499,990	+		RR42_RS20715	0.86	+1.3
4,500,057	-				+0.2
4,500,057	-				-0.1
4,500,057	-				-1.3
4,500,463	+		RR42_RS20720	0.21	-0.5
4,500,464	-		RR42_RS20720	0.22	+0.2
4,500,483	+		RR42_RS20720	0.24	-0.7
4,500,483	+		RR42_RS20720	0.24	+1.3
4,500,483	+		RR42_RS20720	0.24	+0.5
4,500,484	-		RR42_RS20720	0.24	-0.1
4,500,484	-		RR42_RS20720	0.24	-0.1
4,500,484	-		RR42_RS20720	0.24	-0.4
4,500,582	+		RR42_RS20720	0.34	-1.7
4,500,582	+		RR42_RS20720	0.34	+0.8
4,500,582	+		RR42_RS20720	0.34	+0.9
4,500,583	-		RR42_RS20720	0.35	-0.1
4,500,583	-		RR42_RS20720	0.35	+0.5
4,500,583	-		RR42_RS20720	0.35	-0.4
4,500,583	-		RR42_RS20720	0.35	-1.2
4,500,690	-		RR42_RS20720	0.46	-0.0
4,500,690	-		RR42_RS20720	0.46	+0.0
4,500,750	+		RR42_RS20720	0.53	-0.1
4,500,936	+		RR42_RS20720	0.73	-1.8
4,500,936	+		RR42_RS20720	0.73	-0.8
4,500,937	-		RR42_RS20720	0.73	+0.2