Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16925

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,662,857	-		RR42_RS16920	0.45	-0.0
3,663,238	+		RR42_RS16920	0.69	-0.5
3,663,238	+		RR42_RS16920	0.69	+0.9
3,663,238	+		RR42_RS16920	0.69	-0.4
3,663,238	+		RR42_RS16920	0.69	+0.1
3,663,239	-		RR42_RS16920	0.69	-0.3
3,663,239	-		RR42_RS16920	0.69	+0.2
3,663,239	-		RR42_RS16920	0.69	+0.3
3,663,535	-		RR42_RS16920	0.88	+0.3
3,663,535	-		RR42_RS16920	0.88	-1.1
3,663,876	+				+0.9
3,663,877	-				+0.1
3,663,877	-				-0.1
3,663,877	-				-1.2
3,663,877	-				+0.6
3,663,877	-				+0.9
3,663,877	-				-0.3
3,664,013	-		RR42_RS16925	0.27	-1.6
3,664,033	+		RR42_RS16925	0.30	-0.4
3,664,108	+		RR42_RS16925	0.40	+1.5
3,664,109	-		RR42_RS16925	0.40	+0.5
3,664,109	-		RR42_RS16925	0.40	+0.5
3,664,252	+		RR42_RS16925	0.58	+0.2
3,664,252	+		RR42_RS16925	0.58	+1.9
3,664,253	-		RR42_RS16925	0.58	+1.3
3,664,253	-		RR42_RS16925	0.58	-0.2
3,664,498	+				+0.4
3,664,498	+				-1.6
3,664,499	-				+0.2
3,664,516	+				+0.2
3,664,517	-				+0.3
3,664,681	+		RR42_RS16930	0.12	-1.4
3,664,681	+		RR42_RS16930	0.12	-3.0
3,664,682	-		RR42_RS16930	0.12	+0.2
3,665,113	+		RR42_RS16930	0.67	-1.2
3,665,113	+		RR42_RS16930	0.67	+1.8
3,665,114	-		RR42_RS16930	0.67	-0.4
3,665,506	+		RR42_RS16935	0.16	-0.9
3,665,506	+		RR42_RS16935	0.16	-0.3
3,665,506	+		RR42_RS16935	0.16	-0.8
3,665,506	+		RR42_RS16935	0.16	+0.7
3,665,507	-		RR42_RS16935	0.16	-0.1
3,665,507	-		RR42_RS16935	0.16	+1.2
3,665,553	+		RR42_RS16935	0.21	-0.4
3,665,553	+		RR42_RS16935	0.21	+0.4
3,665,554	-		RR42_RS16935	0.22	-0.1
3,665,554	-		RR42_RS16935	0.22	-0.8
3,665,554	-		RR42_RS16935	0.22	-1.1
3,665,554	-		RR42_RS16935	0.22	-0.3
3,665,554	-		RR42_RS16935	0.22	-1.0
3,665,554	-		RR42_RS16935	0.22	+1.1