Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16540

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,581,405	+		RR42_RS16530	0.68	-1.4
3,581,406	-		RR42_RS16530	0.68	-0.6
3,581,453	+		RR42_RS16530	0.73	+1.4
3,581,454	-		RR42_RS16530	0.73	+0.1
3,581,527	+		RR42_RS16530	0.81	-0.4
3,581,527	+		RR42_RS16530	0.81	-0.5
3,581,527	+		RR42_RS16530	0.81	-1.2
3,581,528	-		RR42_RS16530	0.81	+0.4
3,581,540	-		RR42_RS16530	0.83	+1.2
3,581,745	+				+1.0
3,582,003	-		RR42_RS16535	0.75	-1.3
3,582,033	-		RR42_RS16535	0.84	+0.4
3,582,051	+		RR42_RS16535	0.89	+0.9
3,582,061	+				-1.2
3,582,232	+				-3.4
3,582,232	+				-0.4
3,582,233	-				-0.8
3,582,239	-				+0.1
3,582,242	+				-0.2
3,582,242	+				+0.2
3,582,242	+				-2.4
3,582,243	-				-0.3
3,582,298	-				-1.4
3,582,298	-				-0.4
3,582,429	+				+1.4
3,582,429	+				+0.4
3,582,521	+				+0.1
3,582,521	+				-0.8
3,582,521	+				-0.9
3,582,522	-				+0.4
3,582,522	-				+0.5
3,582,625	+		RR42_RS16540	0.12	-0.3
3,582,748	+		RR42_RS16540	0.18	-1.6
3,582,769	+		RR42_RS16540	0.19	+0.4
3,582,769	+		RR42_RS16540	0.19	+3.2
3,582,769	+		RR42_RS16540	0.19	-1.7
3,582,769	+		RR42_RS16540	0.19	-2.5
3,582,911	+		RR42_RS16540	0.25	-0.2
3,582,962	+		RR42_RS16540	0.28	-0.8
3,582,998	+		RR42_RS16540	0.29	-1.4
3,582,999	-		RR42_RS16540	0.29	-2.1
3,582,999	-		RR42_RS16540	0.29	-1.5
3,583,076	+		RR42_RS16540	0.33	+0.2
3,583,077	-		RR42_RS16540	0.33	+0.5
3,583,146	-		RR42_RS16540	0.36	-0.0
3,583,146	-		RR42_RS16540	0.36	-0.1
3,583,169	+		RR42_RS16540	0.37	-1.6
3,583,170	-		RR42_RS16540	0.37	-0.3
3,583,304	+		RR42_RS16540	0.43	+0.3
3,583,305	-		RR42_RS16540	0.43	-0.3
3,583,627	+		RR42_RS16540	0.58	-0.0
3,583,773	+		RR42_RS16540	0.65	-0.2
3,584,066	+		RR42_RS16540	0.78	+1.3
3,584,291	+		RR42_RS16540	0.88	-1.6
3,584,293	+		RR42_RS16540	0.89	-0.7
3,584,371	+				+0.7
3,584,375	+				-0.6
3,584,424	-				+0.6
3,584,676	+		RR42_RS16545	0.23	-2.2
3,584,676	+		RR42_RS16545	0.23	-1.6
3,584,676	+		RR42_RS16545	0.23	+0.2
3,584,677	-		RR42_RS16545	0.23	+0.4
3,584,728	-		RR42_RS16545	0.34	+0.5
3,584,934	+		RR42_RS16545	0.78	-1.2
3,584,934	+		RR42_RS16545	0.78	+1.5
3,584,935	-		RR42_RS16545	0.78	-0.6
3,584,935	-		RR42_RS16545	0.78	+0.2
3,585,010	+				-0.4
3,585,071	+				-0.7
3,585,071	+				+1.6
3,585,072	-				+0.2
3,585,084	+				-1.2
3,585,085	-				+0.2
3,585,085	-				-0.0
3,585,086	+				-1.8
3,585,086	+				+0.5
3,585,087	-				-0.1
3,585,087	-				-0.4
3,585,119	-				+1.6
3,585,119	-				+0.3
3,585,157	+				+0.2
3,585,266	+				-0.4
3,585,267	-				-0.2
3,585,267	-				+1.2
3,585,269	+				+0.6
3,585,270	-				-0.3
3,585,282	-				-0.1
3,585,297	+				+1.3
3,585,400	+				+0.7
3,585,452	+				+0.0
3,585,452	+				-0.6
3,585,456	+				-0.2
3,585,456	+				+0.2