Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15350

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,319,620	+		RR42_RS15345	0.43	-0.1
3,319,620	+		RR42_RS15345	0.43	+0.9
3,319,620	+		RR42_RS15345	0.43	-0.9
3,319,620	+		RR42_RS15345	0.43	-0.4
3,319,621	-		RR42_RS15345	0.43	+0.4
3,319,621	-		RR42_RS15345	0.43	+0.1
3,319,621	-		RR42_RS15345	0.43	+0.0
3,319,621	-		RR42_RS15345	0.43	-0.2
3,319,621	-		RR42_RS15345	0.43	-0.5
3,319,992	+		RR42_RS15345	0.66	+0.7
3,319,992	+		RR42_RS15345	0.66	+0.1
3,319,992	+		RR42_RS15345	0.66	+1.1
3,319,992	+		RR42_RS15345	0.66	+1.1
3,319,993	-		RR42_RS15345	0.67	-1.2
3,319,993	-		RR42_RS15345	0.67	+0.0
3,319,993	-		RR42_RS15345	0.67	-0.6
3,319,993	-		RR42_RS15345	0.67	+0.2
3,320,382	+				+0.4
3,320,382	+				-0.6
3,320,383	-				-0.4
3,320,392	+				+0.8
3,320,392	+				+1.1
3,320,393	-				-0.4
3,320,404	+				+0.7
3,320,404	+				+0.7
3,320,404	+				-1.2
3,320,641	+		RR42_RS15350	0.11	-0.9
3,320,711	+		RR42_RS15350	0.16	+0.8
3,320,711	+		RR42_RS15350	0.16	-1.7
3,320,711	-		RR42_RS15350	0.16	+0.1
3,320,847	-		RR42_RS15350	0.27	-0.1
3,320,912	+		RR42_RS15350	0.32	-0.5
3,320,912	+		RR42_RS15350	0.32	+0.1
3,320,937	-		RR42_RS15350	0.34	-0.8
3,320,987	+		RR42_RS15350	0.38	-1.2
3,320,987	+		RR42_RS15350	0.38	+0.8
3,320,988	-		RR42_RS15350	0.38	-0.4
3,320,988	-		RR42_RS15350	0.38	+3.7
3,320,991	-		RR42_RS15350	0.39	-0.7
3,320,991	-		RR42_RS15350	0.39	+0.0
3,321,134	+		RR42_RS15350	0.50	-0.3
3,321,134	+		RR42_RS15350	0.50	+0.3
3,321,134	+		RR42_RS15350	0.50	+0.6
3,321,135	-		RR42_RS15350	0.50	-0.2
3,321,194	+		RR42_RS15350	0.55	-0.4
3,321,195	-		RR42_RS15350	0.55	+0.2
3,321,198	-		RR42_RS15350	0.55	-0.2
3,321,332	+		RR42_RS15350	0.66	+0.1
3,321,332	+		RR42_RS15350	0.66	+0.2
3,321,333	-		RR42_RS15350	0.66	-0.2
3,321,333	-		RR42_RS15350	0.66	+0.8
3,321,333	-		RR42_RS15350	0.66	+0.1
3,321,521	+		RR42_RS15350	0.81	-0.2
3,321,521	+		RR42_RS15350	0.81	-1.2
3,321,521	+		RR42_RS15350	0.81	+0.1
3,321,522	-		RR42_RS15350	0.81	-0.1
3,321,522	-		RR42_RS15350	0.81	-0.0
3,321,522	-		RR42_RS15350	0.81	+0.3
3,321,602	+		RR42_RS15350	0.88	-0.6
3,321,603	-		RR42_RS15350	0.88	+0.6
3,321,603	-		RR42_RS15350	0.88	+0.6
3,321,603	-		RR42_RS15350	0.88	+0.1
3,322,068	+		RR42_RS15355	0.31	-0.4
3,322,308	+		RR42_RS15355	0.60	-0.9
3,322,308	+		RR42_RS15355	0.60	+0.4
3,322,309	-		RR42_RS15355	0.60	+0.9
3,322,347	-		RR42_RS15355	0.64	+1.7
3,322,347	-		RR42_RS15355	0.64	+0.8