Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14590

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
3,138,502	+		RR42_RS14580	0.71	-0.4
3,138,503	-		RR42_RS14580	0.71	+0.5
3,138,503	-		RR42_RS14580	0.71	-1.5
3,138,587	+		RR42_RS14580	0.79	+0.2
3,138,588	-		RR42_RS14580	0.79	-0.3
3,138,588	-		RR42_RS14580	0.79	-0.3
3,138,692	+		RR42_RS14580	0.90	-1.7
3,138,806	+				-0.2
3,138,806	+				-0.4
3,138,806	+				-0.9
3,138,806	+				+1.0
3,138,806	+				+0.6
3,138,806	+				-0.9
3,138,806	+				+0.3
3,138,807	-				-1.0
3,138,807	-				-0.5
3,138,876	+		RR42_RS14585	0.15	+0.9
3,138,876	+		RR42_RS14585	0.15	+0.9
3,138,876	+		RR42_RS14585	0.15	+0.3
3,138,876	+		RR42_RS14585	0.15	-0.0
3,138,877	-		RR42_RS14585	0.15	+0.3
3,138,877	-		RR42_RS14585	0.15	+1.1
3,138,877	-		RR42_RS14585	0.15	+0.4
3,138,877	-		RR42_RS14585	0.15	-0.5
3,138,903	-		RR42_RS14585	0.21	+1.5
3,138,903	-		RR42_RS14585	0.21	+1.2
3,139,263	+				+0.5
3,139,264	-				+2.1
3,139,264	-				-0.5
3,139,264	-				-0.6
3,139,264	-				+0.7
3,139,508	-		RR42_RS14590	0.40	-1.0
3,139,508	-		RR42_RS14590	0.40	-1.3
3,139,581	+		RR42_RS14590	0.62	+0.8
3,139,630	+		RR42_RS14590	0.77	-1.1
3,139,631	-		RR42_RS14590	0.78	+0.2
3,139,692	+				-0.7
3,139,830	+				+0.8
3,139,936	+		RR42_RS14595	0.16	+1.2
3,139,954	+		RR42_RS14595	0.18	-0.0
3,139,955	-		RR42_RS14595	0.18	-0.3
3,139,955	-		RR42_RS14595	0.18	-0.9
3,139,955	-		RR42_RS14595	0.18	-0.0
3,140,101	+		RR42_RS14595	0.30	-1.1
3,140,102	-		RR42_RS14595	0.30	-0.9
3,140,225	-		RR42_RS14595	0.40	+0.0
3,140,353	+		RR42_RS14595	0.51	+0.3
3,140,354	-		RR42_RS14595	0.51	+0.4
3,140,407	+		RR42_RS14595	0.56	+0.8
3,140,407	+		RR42_RS14595	0.56	+1.7
3,140,408	-		RR42_RS14595	0.56	+0.4
3,140,408	-		RR42_RS14595	0.56	+0.1
3,140,521	-		RR42_RS14595	0.65	+0.1
3,140,548	+		RR42_RS14595	0.68	-1.5
3,140,548	+		RR42_RS14595	0.68	-0.2
3,140,548	+		RR42_RS14595	0.68	+3.1