Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10855

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,322,854	+		RR42_RS10850	0.86	+0.7
2,322,855	-		RR42_RS10850	0.87	-0.4
2,322,855	-		RR42_RS10850	0.87	-2.9
2,322,855	-		RR42_RS10850	0.87	-0.2
2,323,366	+				+0.0
2,323,367	-				+0.5
2,323,384	+				+0.3
2,323,384	+				-1.2
2,323,385	-				-0.0
2,323,385	-				-1.2
2,323,434	+				+0.6
2,323,434	+				+0.5
2,323,435	-				-0.2
2,323,541	+				+0.3
2,323,541	+				+2.0
2,323,542	-				+1.1
2,323,542	-				-1.4
2,323,542	-				+0.9
2,323,542	-				-0.2
2,323,542	-				-0.2
2,323,544	+				-1.6
2,323,544	+				+1.1
2,323,544	+				-0.7
2,323,634	-				+0.5
2,323,890	-		RR42_RS10855	0.22	-1.0
2,324,770	+				-0.2
2,324,870	+				-0.7
2,324,870	+				-0.2
2,324,876	-				+0.2
2,324,876	-				+0.9
2,324,876	-				-0.6
2,324,876	-				-0.9
2,325,003	+		RR42_RS10860	0.31	-0.1
2,325,003	+		RR42_RS10860	0.31	+0.1
2,325,003	+		RR42_RS10860	0.31	-0.3
2,325,004	-		RR42_RS10860	0.31	-0.0
2,325,004	-		RR42_RS10860	0.31	-0.1
2,325,121	+		RR42_RS10860	0.60	-0.9
2,325,121	+		RR42_RS10860	0.60	-0.5
2,325,121	+		RR42_RS10860	0.60	-0.3
2,325,121	+		RR42_RS10860	0.60	+1.0
2,325,121	+		RR42_RS10860	0.60	+0.1
2,325,122	-		RR42_RS10860	0.60	+0.2
2,325,130	+		RR42_RS10860	0.62	-0.0
2,325,130	+		RR42_RS10860	0.62	-1.5
2,325,130	+		RR42_RS10860	0.62	-2.4
2,325,130	+		RR42_RS10860	0.62	-0.1
2,325,131	-		RR42_RS10860	0.62	-0.2
2,325,371	+				-0.2
2,325,371	+				-0.3
2,325,371	+				+0.4
2,325,371	+				+0.4
2,325,372	-				+0.2
2,325,372	-				+0.2
2,325,372	-				+0.7
2,325,372	-				+0.4
2,325,375	+				-0.5
2,325,376	-				-0.1
2,325,376	-				-0.4
2,325,380	+				+0.6
2,325,380	+				-0.7
2,325,401	+				-2.2
2,325,402	-				-0.7
2,325,402	-				-0.8
2,325,739	-		RR42_RS10865	0.32	+0.0
2,325,739	-		RR42_RS10865	0.32	+0.5
2,325,763	+		RR42_RS10865	0.35	+0.8