Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10265

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,196,638	-		RR42_RS10260	0.43	+0.4
2,196,638	-		RR42_RS10260	0.43	-2.1
2,196,809	+		RR42_RS10260	0.58	-1.5
2,196,810	-		RR42_RS10260	0.58	-0.0
2,196,870	+		RR42_RS10260	0.63	-0.1
2,197,459	+				-0.6
2,197,582	+		RR42_RS10265	0.12	-0.5
2,197,709	-		RR42_RS10265	0.18	-0.5
2,197,955	-		RR42_RS10265	0.30	-0.3
2,198,021	+		RR42_RS10265	0.33	-0.4
2,198,022	-		RR42_RS10265	0.33	-0.5
2,198,190	-		RR42_RS10265	0.41	+0.4
2,198,269	+		RR42_RS10265	0.45	-1.1
2,198,270	-		RR42_RS10265	0.45	-2.1
2,198,283	+		RR42_RS10265	0.46	+0.9
2,198,284	-		RR42_RS10265	0.46	-0.6
2,198,379	-		RR42_RS10265	0.50	-0.9
2,198,379	-		RR42_RS10265	0.50	+2.0
2,198,392	+		RR42_RS10265	0.51	+0.3
2,198,392	+		RR42_RS10265	0.51	-1.1
2,198,392	+		RR42_RS10265	0.51	+0.5
2,198,523	+		RR42_RS10265	0.57	-0.2
2,198,802	-		RR42_RS10265	0.71	+0.5
2,198,815	-		RR42_RS10265	0.71	-0.2
2,198,815	-		RR42_RS10265	0.71	-0.6
2,199,077	-		RR42_RS10265	0.84	+0.5
2,199,138	+		RR42_RS10265	0.87	-2.2
2,199,138	+		RR42_RS10265	0.87	-0.2
2,199,149	+		RR42_RS10265	0.87	+1.2
2,199,150	-		RR42_RS10265	0.87	-0.8
2,199,150	-		RR42_RS10265	0.87	-0.5
2,199,168	+		RR42_RS10265	0.88	-0.4
2,199,554	-		RR42_RS10270	0.12	+0.1
2,199,554	-		RR42_RS10270	0.12	+0.9
2,199,627	+		RR42_RS10270	0.21	-0.0
2,199,627	+		RR42_RS10270	0.21	-0.6
2,199,627	+		RR42_RS10270	0.21	+0.3
2,199,627	+		RR42_RS10270	0.21	+0.2
2,199,627	+		RR42_RS10270	0.21	-0.6
2,199,794	-		RR42_RS10270	0.43	+1.0
2,200,142	+		RR42_RS10270	0.88	-0.2
2,200,353	-				-0.4