Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09475

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
2,009,078	+				-0.5
2,009,079	-				-0.1
2,009,349	-		RR42_RS09470	0.25	+0.8
2,009,735	+		RR42_RS09470	0.66	-1.0
2,010,109	-				+0.4
2,010,174	+		RR42_RS09475	0.16	-0.6
2,010,175	-		RR42_RS09475	0.16	+0.3
2,010,259	+		RR42_RS09475	0.27	-0.3
2,010,259	+		RR42_RS09475	0.27	+0.4
2,010,259	+		RR42_RS09475	0.27	-0.3
2,010,259	+		RR42_RS09475	0.27	+2.7
2,010,582	-		RR42_RS09475	0.69	+0.8
2,010,627	+		RR42_RS09475	0.75	+0.2
2,010,627	+		RR42_RS09475	0.75	-0.5
2,010,781	+				-0.5
2,010,782	-				+0.1
2,010,955	+		RR42_RS09480	0.16	+0.1
2,011,171	-		RR42_RS09480	0.45	-1.1
2,011,311	+		RR42_RS09480	0.64	+1.3
2,011,312	-		RR42_RS09480	0.64	+0.4
2,011,312	-		RR42_RS09480	0.64	-0.8
2,011,332	-		RR42_RS09480	0.67	-0.5
2,011,332	-		RR42_RS09480	0.67	-0.6
2,011,537	-				-0.2
2,011,537	-				+0.2
2,011,537	-				-0.5
2,011,634	+		RR42_RS09485	0.11	-0.4
2,011,635	-		RR42_RS09485	0.12	+3.1
2,011,635	-		RR42_RS09485	0.12	+0.5
2,011,635	-		RR42_RS09485	0.12	-0.4