Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07575

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,621,255	+				+0.9
1,621,255	+				-1.5
1,621,255	+				+0.3
1,621,255	+				-0.5
1,621,256	-				+0.5
1,621,256	-				+0.4
1,621,256	-				+0.6
1,621,733	-		RR42_RS07570	0.57	-1.4
1,621,786	+		RR42_RS07570	0.64	+0.1
1,621,787	-		RR42_RS07570	0.64	-3.4
1,621,870	+		RR42_RS07570	0.74	-0.6
1,621,958	+		RR42_RS07570	0.85	-1.1
1,621,958	+		RR42_RS07570	0.85	+1.9
1,621,967	-		RR42_RS07570	0.86	+1.0
1,622,242	+				+0.2
1,622,242	+				-0.5
1,622,242	+				-0.2
1,622,242	+				-0.5
1,622,247	+		RR42_RS07575	0.11	+0.4
1,622,295	-		RR42_RS07575	0.34	-0.0
1,622,386	+		RR42_RS07575	0.79	-1.7
1,622,386	+		RR42_RS07575	0.79	-0.9
1,622,386	+		RR42_RS07575	0.79	+0.2
1,622,395	-		RR42_RS07575	0.83	+0.4
1,622,395	-		RR42_RS07575	0.83	-0.0
1,622,522	+				+0.4
1,622,550	+				+0.3
1,622,806	+		RR42_RS07580	0.14	+1.2
1,622,893	-		RR42_RS07580	0.18	+0.1
1,622,959	+		RR42_RS07580	0.21	-0.0
1,622,959	+		RR42_RS07580	0.21	-0.5
1,622,959	+		RR42_RS07580	0.21	-0.5
1,622,959	+		RR42_RS07580	0.21	-0.3
1,622,960	-		RR42_RS07580	0.21	+0.9
1,622,960	-		RR42_RS07580	0.21	-0.0
1,622,960	-		RR42_RS07580	0.21	+1.6
1,622,960	-		RR42_RS07580	0.21	+0.3
1,622,971	+		RR42_RS07580	0.22	+0.4
1,622,971	+		RR42_RS07580	0.22	+0.2
1,622,972	-		RR42_RS07580	0.22	-0.6
1,622,972	-		RR42_RS07580	0.22	-0.3
1,623,169	+		RR42_RS07580	0.31	+0.6
1,623,169	+		RR42_RS07580	0.31	-0.1
1,623,170	-		RR42_RS07580	0.31	+0.3
1,623,170	-		RR42_RS07580	0.31	-0.5
1,623,170	-		RR42_RS07580	0.31	-0.3
1,623,170	-		RR42_RS07580	0.31	-0.4