Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07455

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,592,550	+				-2.0
1,592,665	+		RR42_RS07450	0.21	-2.3
1,592,665	+		RR42_RS07450	0.21	-2.6
1,592,665	+		RR42_RS07450	0.21	-2.7
1,592,666	-		RR42_RS07450	0.21	-1.7
1,592,666	-		RR42_RS07450	0.21	-1.9
1,592,750	+		RR42_RS07450	0.30	-1.2
1,592,796	+		RR42_RS07450	0.35	-1.1
1,592,983	+		RR42_RS07450	0.56	-1.4
1,592,984	-		RR42_RS07450	0.56	+0.6
1,592,984	-		RR42_RS07450	0.56	-2.1
1,592,984	-		RR42_RS07450	0.56	-2.6
1,592,984	-		RR42_RS07450	0.56	-2.1
1,593,079	+		RR42_RS07450	0.67	-1.1
1,593,080	-		RR42_RS07450	0.67	-0.5
1,593,080	-		RR42_RS07450	0.67	-1.1
1,593,529	-				-0.4
1,593,529	-				-0.2
1,593,711	+		RR42_RS07455	0.19	-0.7
1,593,712	-		RR42_RS07455	0.19	-2.2
1,593,712	-		RR42_RS07455	0.19	-3.6
1,593,712	-		RR42_RS07455	0.19	-0.3
1,593,712	-		RR42_RS07455	0.19	-1.4
1,593,712	-		RR42_RS07455	0.19	-1.0
1,593,712	-		RR42_RS07455	0.19	-0.4
1,593,712	-		RR42_RS07455	0.19	-1.6
1,593,712	-		RR42_RS07455	0.19	-2.6
1,593,757	+		RR42_RS07455	0.24	-3.9
1,593,846	+		RR42_RS07455	0.33	-1.3
1,593,846	+		RR42_RS07455	0.33	-1.1
1,593,846	+		RR42_RS07455	0.33	-1.4
1,593,944	+		RR42_RS07455	0.43	-0.7
1,593,945	-		RR42_RS07455	0.43	-2.3
1,593,945	-		RR42_RS07455	0.43	-2.5
1,593,999	+		RR42_RS07455	0.49	-3.6
1,593,999	+		RR42_RS07455	0.49	-0.4
1,593,999	+		RR42_RS07455	0.49	-3.7
1,593,999	+		RR42_RS07455	0.49	-2.7
1,594,297	-		RR42_RS07455	0.79	-1.9
1,594,422	-				-2.1
1,594,434	+				-0.9
1,594,435	-				+2.9
1,594,505	+				-2.4
1,594,506	-				-1.1
1,594,613	-				-1.1
1,594,613	-				+0.8
1,594,623	+				-1.4
1,594,655	+				-2.0
1,594,655	+				-2.5
1,594,655	+				-2.9
1,594,655	+				-2.9
1,594,656	-				+0.9
1,594,664	+				-2.8
1,594,675	+				-1.8
1,594,676	-				-0.4
1,594,676	-				-0.6
1,594,824	-				-0.2
1,594,973	+		RR42_RS07460	0.14	-0.6
1,594,973	+		RR42_RS07460	0.14	-0.2
1,595,033	+		RR42_RS07460	0.20	-0.0
1,595,034	-		RR42_RS07460	0.20	-1.8
1,595,069	+		RR42_RS07460	0.23	+0.3
1,595,156	+		RR42_RS07460	0.32	-0.6
1,595,192	+		RR42_RS07460	0.35	+0.9
1,595,192	+		RR42_RS07460	0.35	-0.1
1,595,194	+		RR42_RS07460	0.35	-0.2
1,595,195	-		RR42_RS07460	0.35	+1.3
1,595,268	-		RR42_RS07460	0.42	-0.4
1,595,268	-		RR42_RS07460	0.42	+0.8
1,595,268	-		RR42_RS07460	0.42	+1.1