Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06385

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,398,722	+				-0.8
1,398,730	+				+0.2
1,398,824	+				-0.2
1,398,824	+				+0.2
1,398,825	-				-0.2
1,398,825	-				-1.3
1,398,856	+				+0.3
1,398,856	+				-0.5
1,399,186	+		RR42_RS06380	0.48	-0.4
1,399,257	+		RR42_RS06380	0.66	+0.2
1,399,257	+		RR42_RS06380	0.66	+1.0
1,399,257	+		RR42_RS06380	0.66	-0.7
1,399,258	-		RR42_RS06380	0.66	+0.8
1,399,400	+				+0.2
1,399,400	+				-2.2
1,399,401	-				+0.4
1,399,401	-				-0.3
1,399,530	+				+0.7
1,399,562	+				+0.5
1,399,571	+				+0.6
1,399,572	-				+0.2
1,399,862	+		RR42_RS06385	0.28	+2.8
1,399,862	+		RR42_RS06385	0.28	+0.6
1,399,862	+		RR42_RS06385	0.28	+0.1
1,400,051	+		RR42_RS06385	0.45	-0.4
1,400,434	-		RR42_RS06385	0.80	+0.7
1,400,434	-		RR42_RS06385	0.80	-0.3
1,400,457	-		RR42_RS06385	0.82	+1.1
1,400,525	+		RR42_RS06385	0.88	-0.8
1,400,526	-		RR42_RS06385	0.88	-2.7
1,400,528	+		RR42_RS06385	0.88	+0.7
1,400,529	-		RR42_RS06385	0.88	-2.0
1,400,529	-		RR42_RS06385	0.88	+0.7
1,400,748	+				-0.5
1,400,748	+				-0.3
1,400,749	-				-0.1
1,400,933	+		RR42_RS06390	0.10	+0.6
1,401,016	-		RR42_RS06390	0.19	-2.9
1,401,177	-		RR42_RS06390	0.37	-0.4
1,401,177	-		RR42_RS06390	0.37	-0.1
1,401,337	+		RR42_RS06390	0.54	-0.0
1,401,337	+		RR42_RS06390	0.54	+0.3
1,401,337	+		RR42_RS06390	0.54	-0.7
1,401,338	-		RR42_RS06390	0.54	-0.4
1,401,338	-		RR42_RS06390	0.54	-0.3
1,401,408	-		RR42_RS06390	0.62	-1.0
1,401,563	+		RR42_RS06390	0.79	+0.4
1,401,563	+		RR42_RS06390	0.79	+0.1
1,401,563	+		RR42_RS06390	0.79	+0.4
1,401,564	-		RR42_RS06390	0.79	-0.2