Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05210

Experiment: R2A with Chlorite 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 4 mM
1,149,110	+		RR42_RS05205	0.19	-0.5
1,149,110	+		RR42_RS05205	0.19	+0.0
1,149,110	+		RR42_RS05205	0.19	-0.2
1,149,111	-		RR42_RS05205	0.19	-0.2
1,149,111	-		RR42_RS05205	0.19	+0.2
1,149,161	+		RR42_RS05205	0.27	+0.3
1,149,161	+		RR42_RS05205	0.27	+0.1
1,149,161	+		RR42_RS05205	0.27	-2.4
1,149,161	+		RR42_RS05205	0.27	-0.5
1,149,162	-		RR42_RS05205	0.27	-0.3
1,149,162	-		RR42_RS05205	0.27	-0.7
1,149,231	-		RR42_RS05205	0.38	+0.6
1,149,231	-		RR42_RS05205	0.38	-0.5
1,149,248	+		RR42_RS05205	0.41	-0.6
1,149,249	-		RR42_RS05205	0.41	+0.4
1,149,249	-		RR42_RS05205	0.41	+0.9
1,149,249	-		RR42_RS05205	0.41	-0.3
1,149,290	+		RR42_RS05205	0.48	-1.8
1,149,290	+		RR42_RS05205	0.48	+0.7
1,149,291	-		RR42_RS05205	0.48	+0.5
1,149,291	-		RR42_RS05205	0.48	-0.9
1,149,317	+		RR42_RS05205	0.52	-0.8
1,149,329	+		RR42_RS05205	0.54	-0.8
1,149,329	+		RR42_RS05205	0.54	+1.6
1,149,333	-		RR42_RS05205	0.55	+0.0
1,149,464	+		RR42_RS05205	0.76	-0.5
1,149,522	-		RR42_RS05205	0.86	+0.4
1,149,522	-		RR42_RS05205	0.86	-1.4
1,149,522	-		RR42_RS05205	0.86	-1.5
1,149,522	-		RR42_RS05205	0.86	-1.0
1,149,608	+				+0.0
1,149,608	+				-0.4
1,149,609	-				+0.5
1,149,609	-				+0.8
1,149,744	-				+0.2
1,149,883	-				+1.4
1,149,883	-				-0.1
1,149,965	+				+0.3
1,149,965	+				+0.3
1,150,065	-				+0.3
1,150,109	+				+0.7
1,150,110	-				+0.9
1,150,110	-				+0.7
1,150,364	+		RR42_RS05210	0.21	+1.1
1,150,364	+		RR42_RS05210	0.21	+0.2
1,150,365	-		RR42_RS05210	0.21	+1.6
1,150,365	-		RR42_RS05210	0.21	+0.2
1,150,365	-		RR42_RS05210	0.21	+2.4
1,150,607	+		RR42_RS05210	0.31	+0.9
1,150,607	+		RR42_RS05210	0.31	+0.8
1,150,608	-		RR42_RS05210	0.31	+1.5
1,150,608	-		RR42_RS05210	0.31	-0.1
1,150,608	-		RR42_RS05210	0.31	+1.4
1,150,608	-		RR42_RS05210	0.31	+0.7
1,150,608	-		RR42_RS05210	0.31	+1.0
1,150,650	-		RR42_RS05210	0.33	+0.2
1,150,672	+		RR42_RS05210	0.34	+0.7
1,150,672	+		RR42_RS05210	0.34	+0.6
1,150,904	+		RR42_RS05210	0.44	+2.0
1,150,905	-		RR42_RS05210	0.44	+0.2
1,150,941	-		RR42_RS05210	0.46	+0.8
1,151,028	-		RR42_RS05210	0.49	+0.7
1,151,060	+		RR42_RS05210	0.51	+0.8
1,151,060	+		RR42_RS05210	0.51	+0.8
1,151,060	+		RR42_RS05210	0.51	+1.0
1,151,060	+		RR42_RS05210	0.51	+1.1
1,151,061	-		RR42_RS05210	0.51	+1.3
1,151,061	-		RR42_RS05210	0.51	-0.2
1,151,061	-		RR42_RS05210	0.51	+1.4
1,151,195	+		RR42_RS05210	0.56	+0.8
1,151,195	+		RR42_RS05210	0.56	+0.2
1,151,196	-		RR42_RS05210	0.57	+0.6
1,151,196	-		RR42_RS05210	0.57	+0.7
1,151,201	+		RR42_RS05210	0.57	+0.7
1,151,202	-		RR42_RS05210	0.57	+0.3
1,151,202	-		RR42_RS05210	0.57	+1.8
1,151,468	+		RR42_RS05210	0.68	+1.6
1,151,469	-		RR42_RS05210	0.68	+1.0
1,151,564	-		RR42_RS05210	0.72	+0.2
1,152,049	+				+0.3
1,152,143	-				+0.4
1,152,143	-				+1.5
1,152,379	+				-0.0
1,152,379	+				-0.2
1,152,379	+				+0.6
1,152,380	-				+0.6
1,152,647	+				+0.3
1,152,647	+				+0.6
1,152,648	-				-0.6
1,152,648	-				-0.0
1,152,653	+				+0.3
1,152,653	+				-0.3
1,152,657	+				+1.3
1,152,657	+				+0.3
1,152,657	+				+0.5
1,152,658	-				+0.2
1,152,694	-				+0.6
1,152,724	-				-0.1
1,152,922	+				-0.1
1,152,936	+				+0.7
1,152,936	+				-0.6
1,152,936	+				+0.1
1,152,937	-				+0.4
1,152,937	-				+1.0
1,152,937	-				+1.5
1,153,131	+		RR42_RS05220	0.19	-2.1
1,153,157	+		RR42_RS05220	0.21	+0.1