Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5103

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
6,053,612	+				-0.0
6,053,612	+				+1.4
6,053,618	+				-0.1
6,053,669	+				-0.0
6,053,670	-				+0.5
6,053,670	-				+0.1
6,053,767	+				+0.4
6,053,767	+				-2.5
6,053,767	+				-0.4
6,053,767	+				+0.7
6,053,767	+				-0.2
6,053,768	-				+2.1
6,053,998	+		Psyr_5102	0.22	+0.1
6,054,203	+		Psyr_5102	0.48	+0.0
6,054,204	-		Psyr_5102	0.48	+0.3
6,054,204	-		Psyr_5102	0.48	+0.2
6,054,651	+				+0.3
6,054,651	+				-0.1
6,054,652	-				-1.0
6,054,652	-				-0.6
6,054,652	-				-1.3
6,054,652	-				-2.0
6,054,850	-		Psyr_5103	0.25	-0.1
6,054,850	-		Psyr_5103	0.25	+0.3
6,054,883	+		Psyr_5103	0.29	+0.5
6,054,884	-		Psyr_5103	0.29	-1.0
6,054,884	-		Psyr_5103	0.29	+1.0
6,054,887	+		Psyr_5103	0.29	+0.1
6,054,887	+		Psyr_5103	0.29	-0.5
6,054,887	+		Psyr_5103	0.29	+1.1
6,054,888	-		Psyr_5103	0.29	-0.5
6,054,929	+		Psyr_5103	0.33	-0.6
6,054,929	+		Psyr_5103	0.33	+0.8
6,054,930	-		Psyr_5103	0.34	-0.5
6,054,930	-		Psyr_5103	0.34	+1.1
6,054,930	-		Psyr_5103	0.34	+0.6
6,054,930	-		Psyr_5103	0.34	-0.5
6,054,947	+		Psyr_5103	0.35	+0.3
6,054,947	+		Psyr_5103	0.35	-1.3
6,054,948	-		Psyr_5103	0.35	+0.6
6,054,948	-		Psyr_5103	0.35	+0.1
6,054,948	-		Psyr_5103	0.35	+1.3
6,055,010	+		Psyr_5103	0.42	-0.1
6,055,010	+		Psyr_5103	0.42	+1.8
6,055,011	-		Psyr_5103	0.42	-0.8
6,055,039	-		Psyr_5103	0.45	-0.5
6,055,039	-		Psyr_5103	0.45	+1.2
6,055,039	-		Psyr_5103	0.45	+0.9
6,055,073	+		Psyr_5103	0.49	+1.1
6,055,074	-		Psyr_5103	0.49	+1.7
6,055,074	-		Psyr_5103	0.49	+0.3
6,055,306	-		Psyr_5103	0.73	-0.1
6,055,466	+		Psyr_5103	0.90	+0.8
6,055,466	+		Psyr_5103	0.90	+0.1
6,055,467	-				-1.7
6,055,481	+				-0.2
6,055,481	+				-0.5
6,055,482	-				+0.2
6,055,482	-				-0.4
6,055,482	-				+1.5
6,055,482	-				+2.7
6,055,482	-				-1.5
6,055,778	+		Psyr_5104	0.21	-0.3
6,055,778	+		Psyr_5104	0.21	+2.3
6,055,778	+		Psyr_5104	0.21	+0.3
6,055,779	-		Psyr_5104	0.21	+0.1
6,055,782	+		Psyr_5104	0.21	+0.1
6,055,782	+		Psyr_5104	0.21	+0.8
6,055,782	+		Psyr_5104	0.21	-0.8
6,055,782	+		Psyr_5104	0.21	+1.6
6,055,783	-		Psyr_5104	0.22	+0.1
6,055,783	-		Psyr_5104	0.22	+1.1
6,056,216	+		Psyr_5104	0.63	+0.7
6,056,216	+		Psyr_5104	0.63	+1.5
6,056,313	+		Psyr_5104	0.72	-0.4
6,056,313	+		Psyr_5104	0.72	+0.1
6,056,357	+		Psyr_5104	0.77	-0.0
6,056,357	+		Psyr_5104	0.77	+0.0
6,056,545	-				-0.6