Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2618

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
3,172,785	+		Psyr_2617	0.33	+0.9
3,172,786	-		Psyr_2617	0.33	-1.9
3,172,947	+		Psyr_2617	0.47	+0.2
3,173,131	-		Psyr_2617	0.63	-0.5
3,173,759	+				+1.3
3,173,759	+				-0.9
3,173,900	-		Psyr_2618	0.17	+1.3
3,173,900	-		Psyr_2618	0.17	+0.2
3,174,509	-		Psyr_2618	0.48	+0.2
3,174,605	+		Psyr_2618	0.53	+0.2
3,174,606	-		Psyr_2618	0.53	+0.3
3,174,606	-		Psyr_2618	0.53	-0.4
3,174,608	+		Psyr_2618	0.53	-0.4
3,174,608	+		Psyr_2618	0.53	-1.3
3,174,608	+		Psyr_2618	0.53	-2.5
3,174,609	-		Psyr_2618	0.53	-0.8
3,175,091	+		Psyr_2618	0.78	+0.6
3,175,091	+		Psyr_2618	0.78	+0.7
3,175,091	+		Psyr_2618	0.78	+0.3
3,175,092	-		Psyr_2618	0.78	-0.6
3,175,365	-				+1.2
3,175,631	+				+0.7
3,175,632	-				-0.5
3,175,634	+				-1.0
3,175,634	+				+1.4
3,175,634	+				-0.8
3,175,635	-				-1.2
3,175,635	-				+0.6
3,175,635	-				+0.6
3,175,779	-				-0.1
3,176,118	-		Psyr_2619	0.28	-1.0
3,176,199	-		Psyr_2619	0.34	-0.3
3,176,490	+		Psyr_2619	0.56	+0.3
3,176,503	+		Psyr_2619	0.57	+1.4
3,176,503	+		Psyr_2619	0.57	-0.8
3,176,525	+		Psyr_2619	0.59	+0.4