Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2362

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
2,738,925	+		Psyr_2361	0.64	-0.5
2,738,925	+		Psyr_2361	0.64	+0.6
2,738,926	-		Psyr_2361	0.64	-0.5
2,739,042	+		Psyr_2361	0.69	-2.0
2,739,054	+		Psyr_2361	0.69	-0.0
2,739,054	+		Psyr_2361	0.69	-0.2
2,739,054	+		Psyr_2361	0.69	-0.5
2,739,054	+		Psyr_2361	0.69	-1.0
2,739,055	-		Psyr_2361	0.69	-0.1
2,739,055	-		Psyr_2361	0.69	+0.1
2,739,055	-		Psyr_2361	0.69	-1.0
2,739,055	-		Psyr_2361	0.69	+0.9
2,739,055	-		Psyr_2361	0.69	-0.8
2,739,055	-		Psyr_2361	0.69	-1.5
2,739,211	-		Psyr_2361	0.76	-0.5
2,739,324	+		Psyr_2361	0.80	-2.5
2,739,324	+		Psyr_2361	0.80	-0.1
2,739,390	+		Psyr_2361	0.83	+0.6
2,739,426	+		Psyr_2361	0.85	+0.3
2,739,426	+		Psyr_2361	0.85	+0.6
2,739,438	+		Psyr_2361	0.85	-0.7
2,739,439	-		Psyr_2361	0.85	+0.6
2,739,439	-		Psyr_2361	0.85	+0.4
2,739,439	-		Psyr_2361	0.85	+0.0
2,739,524	+		Psyr_2361	0.89	+0.3
2,739,541	+		Psyr_2361	0.90	+0.6
2,739,541	+		Psyr_2361	0.90	-0.3
2,739,542	-		Psyr_2361	0.90	-0.4
2,739,542	-		Psyr_2361	0.90	-1.1
2,739,542	-		Psyr_2361	0.90	-0.7
2,739,542	-		Psyr_2361	0.90	-0.6
2,739,567	+				-0.2
2,739,567	+				-1.7
2,739,568	-				+0.3
2,739,568	-				+0.0
2,739,568	-				+1.9
2,739,568	-				-0.8
2,739,622	-				-1.4
2,739,622	-				+0.9
2,739,622	-				+0.6
2,739,687	+				-1.7
2,739,687	+				-1.5
2,739,687	+				+0.5
2,739,687	+				+1.2
2,739,703	+				-0.6
2,739,703	+				-0.5
2,739,704	-				+1.1
2,739,704	-				-1.7
2,740,121	+		Psyr_2362	0.40	+0.8
2,740,467	+		Psyr_2362	0.81	-1.0
2,740,467	+		Psyr_2362	0.81	+0.6
2,740,467	+		Psyr_2362	0.81	-0.8
2,740,467	+		Psyr_2362	0.81	-0.4
2,740,467	+		Psyr_2362	0.81	-0.5
2,740,468	-		Psyr_2362	0.81	+0.0
2,740,468	-		Psyr_2362	0.81	-1.7
2,740,468	-		Psyr_2362	0.81	-1.7
2,740,468	-		Psyr_2362	0.81	-0.4
2,740,589	+				+0.6
2,740,669	+				+1.0
2,740,669	+				+1.6
2,740,670	-				-1.0
2,740,687	+				+0.8
2,740,688	-				+0.9
2,740,783	-				-1.2
2,740,994	+		Psyr_2363	0.23	+0.0
2,741,126	+		Psyr_2363	0.38	+0.1
2,741,398	+		Psyr_2363	0.71	+0.4
2,741,398	+		Psyr_2363	0.71	-2.0
2,741,398	+				+1.0
2,741,398	+		Psyr_2363	0.71	-0.8
2,741,398	+		Psyr_2363	0.71	-0.4
2,741,398	+		Psyr_2363	0.71	+0.5
2,741,398	+		Psyr_2363	0.71	-1.3
2,741,398	+		Psyr_2363	0.71	-0.8
2,741,399	-		Psyr_2363	0.71	+0.6
2,741,399	-		Psyr_2363	0.71	-1.5
2,741,399	-		Psyr_2363	0.71	+0.8
2,741,399	-		Psyr_2363	0.71	-2.1
2,741,399	-		Psyr_2363	0.71	-0.4
2,741,399	-		Psyr_2363	0.71	-0.8
2,741,399	-		Psyr_2363	0.71	-0.6
2,741,441	+		Psyr_2363	0.76	-0.7
2,741,524	-		Psyr_2363	0.86	-0.5
2,741,524	-		Psyr_2363	0.86	-0.2