Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2249

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
2,614,899	+		Psyr_2248	0.46	+0.4
2,614,899	+		Psyr_2248	0.46	+0.6
2,614,900	-		Psyr_2248	0.46	-0.7
2,614,914	+		Psyr_2248	0.47	+0.3
2,614,917	+		Psyr_2248	0.47	+1.0
2,614,917	+		Psyr_2248	0.47	-0.2
2,614,918	-		Psyr_2248	0.48	-0.8
2,614,918	-		Psyr_2248	0.48	+0.5
2,614,918	-		Psyr_2248	0.48	+0.6
2,615,194	-		Psyr_2248	0.75	-0.7
2,615,402	+				+0.9
2,615,402	+				+0.2
2,615,494	+				-0.1
2,615,494	+				+0.0
2,615,495	-				-0.6
2,616,026	-		Psyr_2249	0.70	-1.1
2,616,064	+		Psyr_2249	0.75	-1.6
2,616,065	-		Psyr_2249	0.75	-0.9
2,616,065	-		Psyr_2249	0.75	-1.2
2,616,065	-		Psyr_2249	0.75	-1.7
2,616,071	+		Psyr_2249	0.75	-0.3
2,616,215	+				-1.0
2,616,331	+				+0.2
2,616,332	-				+0.9